Ll_transcript_474292

• Id Trinity: TRINITY_DN52032_c1_g1_i12
• Name Transcript: Ll_transcript_474292
• Sequence: CAAAAATACACAAAGGCTTTTCTCAATTGCTTTACCCGTCCTTCCCCCTATTCCTCTCTCGCGCTTCTGGTGAGTCGCACCACTCATCGATCTGCCTTCC CCTCTGCCACCTATCTCCTCCTCACTTCACTCCATTGCCACCGCTACTTTCTTTCTCTCTCTACAAATTCTCTACTCTCTCTCTACAACTTCTAAGCATT CATTTCCAAATCTCGAATCGCGCACCTCGTAGACACCACTGTTGTGTTCAATTTCATAGAAAACCGTTCAAGTTCGTGATCAATTGAAGAAAATTAGAAT CAGCATAGAATTCTCTATACAAGAACTCAGATCAAAATCGTAGTTGACTAGTAGTGTTATTTTGTGTGTGCAAAGATGATGGCTGAGGATCTCGGTGTGG AAGCGAAGGAAGCAGCGGTTCGTGAAGTCGCGAAGCTTTTACCACTTCCGGAGCTTCTTCAGGCAATCTCCTCCATCAAGGCTGATTACATTTCGCGCCA ACAGGCCAATGATGCACAGCTTAGTACAATGGTTGTAGAGCAGGTTGAGCAAGCACAGGCAGGACTGAAATCACTCTCCTTGTCTGAGAAGTCAGTACAC CAGCTCCGGGAAAACTTTGTCTCCATTGAGAAGTTATGTCTAGAGTGCCAAACATTAATTGACAACCACGACCAGATAAAGCTACTCAGCAATGCCAGAA ATAACTTGAACACAACCTTGAAGGATGTTGAAGGTATGATGTCAATCTCTGTCGAGGCAGCAGAGGCTCGGGATTCTTTGAGCGATGACAAAGAAATTGT CAACTCTTATGAGAGGTTAACTGCTCTTGATGGGAAACGGAGATTTGCATTAGCAGCTGCAGGATCTCACAAGGAAGAGGTTGGAAGACTAAGAGAATAT TTTGAAGACGTTGATCGAACTTGGGAGACCTTTGAGAAGACACTATGGGGCCATATTTCCAATTTCTACAAACTTTCTAAAGAAAGCCCACAGACTTTGG TTCGTGCTTTACGGGTTGTTGAAATGCAAGAAATCCTTGATGAACAAGTTGCAGAGGAAGCAGCTGATGCTGAAGGGGATGGTGCAATATCATCAGTCGC AAATCCTGCCATAAAATCTACAAGTTCAATGGCTTCTTCTAAAAATTTGACACAGCAAAAAATGAAAGTTCATGGGAAAGGCTTTAAGGATAAGTGCTAT GAGCAAATACGGAAGACTGTAGAAGGACGCTTTAACAAGCTTCTTACGGAGCTTATCTTTGAGGATCTGAAAGCAGCACTAGAGGAAGCTCGGGTGATTG GGGACGAACTTGGAGACATCTATGATTATGTAGCTCCCTGCTTTCCTCCAAGATACGAAATTTTCCAACTAATGGTAAATCTGTACACTGAAAGGTTTAT TCAGTTTCTGAGGTTGCTCAGCGACAGGGCAAATGAATTAACAAATATTGAGATATTAAAGGTTACTGGTTGGGTGGTTGAATACCAGGATAATCTGATT GGGCTTGGTGTTGACGACTCTCTAGCCCAAGTCTGCTCTGAGAGTGGTGCCATGGATCCCCTTATGAACTCTTATGTTGAAAGAATGCAAGCTACAACTA GGAAATGGTACTTGAATATTTTGGAGGCTGATAAAACACAGCCCCCAAAGAAAACAGAAGATGGGAAGCTGTATACCCCAGCTGCAGTTGATCTATTCAG GATACTTGGAGAGCAAGTACAAATTGTTCGGGATAATAGCACTGATGTCATGTTATACAGAATCGCATTGGCAACCATTCAGGTGATGATTGATTTTCAA GCAGCTGAAAAGAAGAGACTTGGAGAGCCTGCTTCAGAAATTGGTCTGGAACCTTTATGTGCTATGATTAACAACAATTTACGCTGCTATGATCTTGCAA TGGAGTTAAGTAATAGTACCATAGAAGCCCTTCCTCAGAACTATGCTGAGCAGGTTAATTTTGAAGATACTTGTAAAGGTTTTCTCGAGGTTGCTAAGGA AGCTGTGCATCAAACTGTTAGTGTAATATTTGAAGATCCTGGAGTCCAGGAGTTGCTGGTAAAGCTATACCATAAAGAATGGAGTGAGGGGCAGGTTACG GAGTACTTGGTTGCGACTTTTGGTGATTATTTTACTGATGTAAAAATGTACATTGAAGAAAGATCTTTTAGGAGATTTGTTGAAGCCTGCCTGGAGGAAA CAGTGATTGTTTATGTTGACCATCTCCTAACACAGAAAAACTACATTAAGGAAGACACTATTGAACGGATGAGACTAGATGAGGAGGTCATCATGGACTT TTTTAGGGAATATATCAGTGTTTCTAAAGTTGAAAACAGAGTGAGTATACTTAGCGACCTGAGGGAACTTGCTTCAGCAGAGAGTCTGGATACCTTCACA CTCATCTATACTAATATACTCGAACATCAACCTGACTGCCCGCCTGAAGTGGTTGAGAAACTTGTTGGACTGCGAGAAGGCATTCCTCGGAAGGATGCCA AAGAGGTGGTACAAGAATGCAAAGAGATATATGAAAATTCTCTTGTTGATGGAAGACCTCCAAAGACGGGTTTTGTTTTTCCACGAGTGAAGTGCTTAAC AGCATCTAAGGGTGGCCTTTGGCGTAAACTCACTTAAAAGTACGATTCCATTCACTTATTTCATTGTCTGTTTTTCCTTTTTGTTATTTGTCATTTGTGC ATAAATCACATATTATGTTATGGTGTCAATAGAGAAGTTTTGTAATATATAAGTACTAGTTACTTACCCTATAACATGTTGGCAGTTTTTTCAACTCAGT TTCATTATATATATGGTTGTGAACATTTATGGTGATACGTATGATGTCATTAATCTGTGCCATTGATGAAGGGTCATAATAGTGTTATCTAGTAACTGGT CAACTTGCTATTAGTAGAAAGATAAATGTTATTCACTTTAATATCTTAGAAAACATATTTGCTGAAGCAAGGAAATTACCATTATCCCCG
• Tissue: pods
• Gene name: LI_gene_189516;
• Additional information: details;

Expression of Ll_transcript_474292

FPKM

• PAB: 5.4
• PNAB: 12.6
• PS1: 12.6
• PS2: 8.3
• PS3: 10.6
• PW1: 10.9
• PW2: 13.4
• PW3: 9.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_474292

• Blastp: Exocyst complex component SEC6 from Arabidopsis with 88.76% of identity
• Blastx: Exocyst complex component SEC6 from Arabidopsis with 88.76% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT1G71820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461452.1)
• Pfam: Exocyst complex component Sec6 (PF06046.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;