Ll_transcript_474277

• Id Trinity: TRINITY_DN52032_c1_g1_i3
• Name Transcript: Ll_transcript_474277
• Sequence: GCTGTTTTAATAACATTGTTATTAAGCATAAAAACACAACTATTCCTCTCGCGCTTCCGGCGAGTGCGCTCCACTCTTCAACCTCCGTTCCCGTCTGCCA CCTACTCGCTCCACTGCCACATTCACTCACTTTCTCTCTCTAGAACTTTTCTCCTTCTCTCTCTAGAAAATTCTCTTCCTCTCTCTCAAATCGCGCACCG CAATCTCGTGTTCAAGTTTCTCAAAACTCGATCAAACTCAATCGATTAAATCATCACATAATCTCTGACACAAGAATCCAAAATCAAAATCTCAGTCGTA GTTTTTGGTGTGCAAAGATGATGGCTGAGGATCTCGGTGTGGAAGCGAAGGAGGCAGCGGTTCGTGAAGTCGCGAAACTGTTGCCACTTCCAGAGCTTCT TCAGTCAATCTCATCAATCAAAGCCGATTACATTTCGCGCCAACAGGCTAATGATGCACAGCTTAGTACAATGGTTGTAGAGCAGGTTGAGCAAGCACAG GCAGGACTGAAATCACTCTCCTTGTCTGAAAAGTCAGTAAACCAGCTTCGGGAAAACTTTCTCTCCATTGAGAAGTTATGTCAGGAGTGCCAGACATTAA TTGACAACCATGACCAGATAAAGCTACTTAGCAATGCCAGAAATAACTTGAACACAACCTTGAAGGATGTTGAAGGAATGATGTCCATCTCTGTCGAGGC AGCAGAGGCTCGAGATTCTTTAAGTGATGACAAAGAAATTGTTAACACTTATGAGAGATTAACCGCTCTTGATGGGAAACGGAGGTTTGCATTAGCAGCT GCAGCATCTCACAAGGAAGAGGTTGGAAGACTAAGAGAATATTTTGAAGATGTTGATCGAACCTGGGAGACCTTTGAGAAGACACTATGGGGCCACATTG CCAATTTCTACAAACTTTCTAAAGAAAGCCCACAGACTTTGGTTCGTGCTTTACGGGTTGTTGAAATGCAAGAAATCCTTGATGAACAGGTTGCAGAGGA AGCAGCTGAGGCTGAAGGGGACGGTGCAACAGCATCAGTCGCAAATCCTCATAAGAGTGCCATAAAATTGAAAGTTCATGGGAAAGGCTTTAAGGATAAG TGCTATGAGCAAATAGGGAAGACAGTAGAAGGACGCTTTAACAAGCTTCTTACGGTGTTTGTGTTTGAGGACCTGAAAGCAGCTTTAGAGGAAGCTCGGG CGATTGGAGATGAACTTGGAGATATCTATGATTACGTAGCTCCCTGCTTTCCTCCAAGATATGAAATATTCCAACTAATGGTAAATCTATACACTGAGAG GTTTATTCAGTTTCTGAGGTTGCTTAGCGACAGGGCGAATGAATTAACGAATATTGAGATATTAAAGGTTACTGGTTGGGTGGTTGAACACCAAGATAAT CTGATTGGGCTTGGTGTTGACGACTCTCTAGCCCAAGTCTGCTCTGAGAGTGGTGCTATGGATCCTCTTATGAACTCTTATGTTGAAAGAATGCAAGCTA CAACTAGGAAATGGTACTTGAATATTTTGGAGGCTGATAAAACACAGCCCCCAAAGAAAACAGAAGATGGGAAGTTGTATACCCCAGCTGCTGTTGATCT ATTCAGGATACTTGGAGAGCAAGTACAAATTGTTCGGGATAATAGCACTGATATCATGTTATACCGAATCGCATTGGCAACCATTCAGGTCATGATTGAT TTTCAAGCGGCTGAAAAGAAGAGACTCGGAGAACCTGCTTCTGAAATTGGTCTGGAACCTTTATGTGCTATGATTAACAACAATTTGCGCTGCTATGATC TTGCAATGGAACTGAGTAATAGCACCATAGAAGCGCTTGCACAGAACTATGCTGAGCAGGTTAATTTTGAAGATCCTTGTAAGGGTTTTCTCGAGGTTGC TAAGAAAGCTGTGCATCAGACTGTTAGTGTAATATTTGAAGATCCTGGAGTCCAGGAGTTGCTGGTAAAGCTATACCATAAAGAATGGAGTGAGGGGCAA GTTACTGAGTATTTGGTTGCAACATTTAGTGATTATTTTAGTGATGTAAAAATGTACATTGAAGAAAGATCCTTCAGGAGATTTGTTGAAGCCTGCCTGG AGGAAACAGTGATTGTTTATGTTGATCACCTCCTAACACAGAAAAACTATATTAAAGAAGAAACAATTGAACGGATGCGGCTAGATGAGGAGGTCATCAT GGACTTTTTCAGGGAATATATCAGTGTTTCTAAAGTTGAAAACAGAGTGAGTATACTCAGCGACTTGAGGGAACTTGCTTCAGCAGAGAGCCTGGATACC TTCACGCTCATCTATACTAATATACTTGAACATCAGCCTGACTGCCCGCCTGAAGTTGTCGAGAAACTTGTTGGACTACGAGAAGGCATTCCTCGAAAGG ATGCTAAGGAGGTGGTACAAGAATGCAAAGAGATATATGAAAATACACTTGTTGATGGAAAACCTCCAAAGACAGGATTTGTTTTTGCAAGGGTGAAGTG CTTAACAGCAGCTAAGGGGGGCCTTTGGCGTAAACTTACTTAAAACTCAAATTCCATTCACTTATTTTCATTCTTTCTTTATTCCTTTTAATTATTTGTG TCCAAATCCCATATGTTATGGTGTCAATAAAGAAATTTTGTAATATACAACTAGTTACTCTATAATATTTTGAAATTTTATTTCCGTTCTCAGTTTCACT ATGCACAGTATGTGGTTGACATTTGCAAAACTTCTCTATTCAGAAAATGCTTTTGTTTGCTTAACCTTGCAAATCACGTAGGTGTGTATCTTGGAATGTT TTTTTGTTCAGTTTTTTATATATAACAGTATCATTCAC
• Tissue: pods
• Gene name: LI_gene_189516;
• Additional information: details;

Expression of Ll_transcript_474277

FPKM

• PAB: 2.3
• PNAB: 6.8
• PS1: 6.4
• PS2: 5.6
• PS3: 6.9
• PW1: 5.9
• PW2: 5.5
• PW3: 4.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_474277

• Blastp: Exocyst complex component SEC6 from Arabidopsis with 86.9% of identity
• Blastx: Exocyst complex component SEC6 from Arabidopsis with 86.9% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT1G71820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413792.1)
• Pfam: Exocyst complex component Sec6 (PF06046.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;