Ll_transcript_473361

• Id Trinity: TRINITY_DN52033_c0_g1_i10
• Name Transcript: Ll_transcript_473361
• Sequence: GTAACTTCTGGTAGTTTCTTCAACAACGTAATCTTAGAAAAATCATCGCCTCCATATTCGTCGCGACGTTTGGTATCCTTCTTTGTGGGGCTAGTTCTGT GCAATTCCTTGGTCAAAGGCTTTGCGGCTGACCAAATAGCATGGCGGATCAGGGCTCCAATGAAAGCTCCAGTTCTGGCAATATTTCAGCCGAGTTTTCG GATTCAACTCTTCAGCTCAATATCAAGACCCTTGATTCCCGCATCTGTAGTTTTCAAGTGGACAGAAATATGTCTGTTTCATCATTCAAAGAGAAAATTG CCAATGAAACAGGTGTTGCAACGAGCCGGCAACGGCTGATATTTAGAGGAAAAGTATTAAAGGATGAGCACCTTCTTCCTGAGTATCATCTCGAAAATGG AGATACATTGCATTTAGTTGAAAGGCAACCAAATCCATCACAGGTTTCCGGTATGAGTTCTGCTGAGCCAACTGTTACAAATGCTAACCAAGGGAATGAT GCTGGCTCGGGGGTTCCTGGTAATCGTGTTGGGACGATTTCACACAGTGTTGTTCTCGGGACTATTAATATGGGGGAACAAGGTGACAGCATGGTTCCTG ACCTTAATGGGGTTATTGGGGCGGTCTTGAATTCTATTGGCATTGGTGGCCAGAACAGAAGTAGTGTTTCTAATGCTACACAAACTTCAGCTTCATCAGG GAGTGAAACTGAAGGTGTGCATGCTGGAAATTGGAACCTAGCAGGAAATCAAGCACAGTCTGGACAGACATTTAATGGTCAGGCATTCCAGTCTCTTCCT CAAGTTGTTCAGATTCCTGTCCCGGCGGGGGCCATACCTATTCCTTCGCTTAATGCACCAATCCCTCATTCATTGAACACACTGTCTGAGTTTATAAATA GCATGGAACACACACTATCACAAGATGGTCATGGGCCAAATCTGTCTTCAACTAACGCCAGAGATCAACAAGTAGAATTGCCAACCAATGCACAAGGGTT GCCTACGCTTGAAGCATTAAGCACCATTGTGCGTCGCACAGAACAATTGCTTAGTGATCATGCTGTTGCTGCTTTATCTCATATTGCAGGACGCTTGGAC CGAGACGGAACTTCTTCTGATTTAAGTATAAGGGGTCAAATTCAGTCAGAATCGGTGCAAACAGGAATTGCTATGCAGCATTTAGGTGCACTTCTTCTCG AGCTTGGCCGAACAATGTTGACACTGCGTATGGGGCAGTCTTATGCAGAGTCTGCCATTAATGCTGGACCAGCAGTTTATATTTCACCATCAGGACCGAA TCCTATAATGGTGCAGCCCTTTCCACTTCAGACAAGCCCCCTCTTTAGCGGTTCTGTTCCTTCTTCAACTCCTACAACTTCTGGCGCTGTCGGTGTTGGA AGTGTTCCTAGGAACGTAAACATTCATATACATGCTGGTACCTCTCTTGCACCAATTATTTCACCAATTGGTTCTAGGCCAAATAATGGGGATGGGATAG CAGGTGAACTCCATAGTGAGCCTGCCTCTGGTGTTGGAGTTGCTAGCAGCACACAAACTGGGTTTGGTCTTTCTACTTCACAGCCACCTTCTGATCCAAC TCCATTATCACCATCAGTTGTAGCTGAAATCACTTCTCACATTAGTGACATTCTTGGTGATATGCAAAGAGATAACACAGAGCTGTCATCTTCTGATCCA ACTACATTGTCATCGTCAGTTTTAGATGAAATCAATTCTCACCTTAATAACATTCTTGGTAATATGCAAGGAGATAACACAGATCTGTCAGGTCAAATAG AATCAACTAGTCGGCATTTGCCTGCCAGTTCTGAATCACGGCCTGCACCGGGAAACCAACAGCTAGGTACCATGGAGGTGAATGGCCTTGGGGTATCCTC GGTTGGTTGTACTTCTGAAAGTGGAGTACAGAAGCCCCAAACAGAGGCAGCACAAACCTGTTATAGTGACGAGAGAGATGATTCGGTTGACAAATTTGTT TCTGACCAAGTTTCTTCAAGCGGAGAAACAATAACAAAATCATACAAAGTACAAGGTGCTCCATCTGTAAGTGAAGAACGAGATGCAACTGAACCTGCCA AAGCTGCTCCATTAGGATTGGGTATGAGTGGTCTGGAGCGTAAAAAGCGAACTCGCCCTCAACCTCCTGCAAGCAAGGGTGCTGATGGTGAACTATCTGG TTCTTCTGCCAATCAAAGTCATCAAACTAGAACAGATGGTCAACAAATATTGCGAACTCTTGCCAGTCATGGATCTGCTCTGAATTTGAGAAACCCTAAT GGGCCATCCCAGCAGCCTTTGCCCTCTGGTGATAACCAGATTGATATGGCTGGTTTAATGTCTCAGGTTTTGCATAGCCCTGCTATGAATGGTTTGTTGT CAGGGGTTTCACAGCAAACTAGAGTTGACTCACCTGATGGCTTGAGGAATATGTTGCAACAGTTCACACATAATCCTCAGATGATGAACACAGTCAATCA AATTGCTGAACAGGTTGGCAGCGAGGATATTGAAAATATGTTTTCTGGAATGGAAAGAGGGCAAGGCGGCGGTATTGACTTGTCAAGGATGTTTCAACAA ATGATGCCAATTGTATCTCGAGTCCTTGGTGGGGGAAGTCCTCCCCCACTCTTCTCTGCAGCAGAACCACAGCCCCAGGCTCCCCACAGAGATGAAAATT CTTATAACGGAAGTTTACAGCTTGACCTTCAACCATTGGTAGAGAGGATTGAGCGCCGGAGTTCACCCACGGATGTTTTCCGTGCTGTCGCTGAAAATGC TATCCATGTATCTGGCAATGAAAGTGCTTCTAATGATCTTCTGGATGAGTTATGCAGCAATGAGAGTCTTATCGGTGAATATGTGAAGATGTTGCGAAAT GATGTAAAGCAACGATGCAAGGGGCATTCTGAGTTGGACAAGTCCTAATTCCAGCATGTGTGGATATGTATTTCCTGCTTCACTTTCTATTTTATGTCAT AACTCCAATCCTTTCTGAAAGTCCTTCCATGAATTAAATGATTAATTGGTCTGGATAATTTTCACTGACTTCCAGATCGTTTGAAAATTTAGTATACACT ATATGCCTGATAGTTGGTTCAAATGTATCATTGAGGTGTTTAGTTGCCTCCACTGTCATATATTTATGTCCTTTTGACTATATATCATCTTTTATCCTCA ATTTAGAATTTCAGACAATGGATGATGTTTTAACGTAATATGACTTCATTGACTTGTG
• Tissue: pods
• Gene name: LI_gene_189523;
• Additional information: details;

Expression of Ll_transcript_473361

FPKM

• PAB: 0
• PNAB: 7.8
• PS1: 8.2
• PS2: 5.6
• PS3: 0.7
• PW1: 2.5
• PW2: 0.9
• PW3: 3.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_473361

• Blastp: Large proline-rich protein BAG6 from Mus with 36.84% of identity
• Blastx: Large proline-rich protein BAG6 from Mus with 36.5% of identity
• Eggnog: tail-anchored membrane protein insertion into ER membrane(ENOG410XS9P)
• Kegg: Link to kegg annotations (224727)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413709.1)
• Pfam: Ubiquitin-2 like Rad60 SUMO-like (PF11976.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;