Ll_transcript_473352

• Id Trinity: TRINITY_DN52033_c0_g1_i2
• Name Transcript: Ll_transcript_473352
• Sequence: GACGAGCTTTTTGTACCCCAACCAAGATCACGTGTTATTATTAGTTTCTTACTTAATTCTCCGACCAGAAATTTATAAACGGTGGACGCATCCATTTCTC ACAGTTTCTTCACCGACGTTATCTATTCAAAGATCATCGCCTCCTTCTTCGCCACCACCTTAATTTGATATCATCCTTTGTGGGGTTAGTTTTCTACAAT TCCTTGGTCAAAGGCTTTGCGGCTGACCAAATAGCATGGCGGATAAGGGCTCCAATGAAGGCTCCATTTCTGGCAATATTGCAGCCGAGTCTTCCGAGAC TCTTCAGCTCAATATCAAGACTCTAGATTCCCGTATCTACAGTTTTCAACAGGACAAAAATATGTCTGTTTCATCATTCAAAGAGAAAATTGCCAACGAA ACTGGTGTTCCAATTAGCCAGCAACGACTGATATTTAGAGGAAGAGTATTAAAGGATGAGCACTCTCTTTCCGAGTATCATCTTGAAAATGGACATACCT TGCATTTAGTTGAAAGGCAACCAAATCAGTCACAGGTTTCCGGTACGAGTTCTGCTGAGTCAACTGTTACAAATGTTAACCAAGGAAATGATGCTGGCTC GGGGGTTCCTCGTGCTGGACAGATTTCACACAGTGTTGTTCTTGGGACAATTAATTTAGGGGAACAAGGTGGAGGCATGGTTCCTGACCTTAGTGGGGTT ATTGGGGCAGTCTTGAATTCTTTTGGTATTGGTGGCCAGAGCAGAAATAGTGTTTCTAATGCTACACAAACTTCAGCTCCATCAGGGAATGAAACTGAAG GAATACATGCTGGAAATCAAAACCTAGCAGGAAATCAAGCACAGCCTGGACAGGCATTTCGTGGTCAGGCATTCCAATCTCTGCCTCAACTTGTTCAGAT TCCTGTCCCTGCAGGGACCATACCCATTCCTTCGCTTAATGCACCAATCCCTCATTCATTGACCACACTGTCCGAGTTTATAAATAACATGGAACATACA CTATCACAAAATGGTCATCGGCCAAATCTGTCTTCAACTAACCACGGAGGTCAGCGCATAGAATTGCCAACCAATGCACAAGGGTTGCCAACGGTTGAAG CATTAAGTGCCATCTTGCGTCGCACTGGACAATTGCTTAGTGATAACACTGTTGCCGCACTATGTCGTATTGCAGGACACATAGAGCAGGAGGGAACTTC TTCTGATCTAAGTGTAAGAGGCCAAATCCAGTCAGAGACTATGCAAACTGGAATTGCCGTGCAGCATTTAGGTGCACTTCTTCTTGAGCTTGGCCGAACA ATGTTGACACTGCGTATGGGGCAGTCTTATGCTGAATCTTCTGTTAATGCTGGTCCAGCAGTTTATATTTCTCCATCAGGACCGAATCCTATAATGGTGC AGCCCTTTCCACTTCAGACACGCTCTCTTATTGGTGGTCCTGTTCCTCCAACTCCAACACGTGGTGCTGTTGGTGTTGGAAGAGTTCCTAGGAATGTAAA CATTCATATACATGCTGGAACCTCTCTTGCACCAATTGTTTCATCAATTGGTTCTAGACTAAATAACAGGGAAGGTACAAGAGGTGAACACCATATCGAG CTTGGCTCTGGTGTTGGAGTTGCTAGCGGCACAGAAACTGGGTTTGGTGTTTCTACTTCACAGCCACTTTCCGATACAGCTCCGTTGTCATCTGTTTTAG CTGGAATCAATTCTCGCCTTAGAAACTTTGTTGGTAACATGCAAGGAGATAACACAGTTCTCTCAGGTCAAATAGAATCAACTAGTCAGGATTTATCTGC TGGTTCTGACTCTATACCTGCACTGGGAAACGAACAGCGAGATACCATGGAGATGAATGGCATAAGGGCTGCTACCGTATCCTCAGTTGGTTGTATTTCT GAAAGTGGTCTACAGAAGCCCCAAACAGAGGCAGCCCCAACCTGTAGTAGTGGTGAGAGAGATGTTTCAGTTGACAAATTTGTTTCCGATCAAGGTCGTT CAAGCATAGAAACAATAGTGAAATCAGAAAAAGTACAAGGTGCTCCATCTGTAAGTGAAGAACGGGATGTAGCTGAACCTGCCAAAGCTGCTCCATTAGG ATTGGGTATGGGTGGTCTTGAGCGTAAGAAGCAAACTCGACCTCAACCTGCTGTAAGTAAAGGTTCTGGTGATGGATCATCTGGTTCTTCTGCCAATCAA AGTCAGCAAACTAGAACAGATGGACAAAGTTTATTGCAAACTCTTGCCAGTCATGGATCAACTGTGAAATTGGGAAATCCTAATGGGCCATCCCAGCAGC CCCTGCCCACTGATGATAGCCAGATTGATATGGCTGGTTTAATGTCTCAGGTTTTGCATAGCCCCGCTATGAATGGTTTGTTGTCAGGGGTTTCACAGCA AACTGGAGTTGACTCACCGGATGGCTTGAGGAATATGTTGCAACAGTTCACAGAAAACCCACAAATGATGAACACGGTCAACCAAATTGCAGAACAGGTT GGCAACCAAGATATTGGAAATTTGTTTGCTGGAATGGGAAGTAGACAAGGTGGTGGTATTGACTTGTCAAGGATGTTCCAACAGATGATGCCAATTGTAT CTCGAGCCCTTGGTGGTGGGACTGCTCCCCCTCTATTCTCTGCTACGGGACCACAGCCCCAGGCAGCCTCCAGAGATGGGACACTTGACAGAGATGATAA TCAAAGTTTACAGCTCAACCTTCAATCAGTGGTGGAGAGAATTGAGCATGTGAGCCCACCTGTGGATGTTTTCCGTGCTGTAGCTGAAAATGCTGTACAT GTATCCGGCAATGGGAGTGATTCTAATGATCTCTTGGAGGAGTTATGCAGCAATGAGAGTCTTGCCAACGAATATGCCGAAATGTTACGAAATGATGTAA AACAACGATTCAAGGGACATTCTGAGGTGGACAAGTCCTAACTCCAGCATGTGTGGATATGTATTTTCTGCTTCATCGCTTCTATTTTGTATCAAAACTC TTATCCTTTCTGAAAGTCCTTCAGAAAATGAATTTGGGAGTGTCATGCCCCAAATGATGATTAATTGGTCTGTGGTTCATTTTTACAGACTTCCAGATCT AAGTGAAAAATTAGTATACATTTAATTGATCTGGTTTGCTGAGGAGTTTAGTAGCCTCCACTGTAATATATACATCTTTTGGGATCAATTTAGAGTTTTC ATTGTTTTCTGTACTGAATGGCTGAATCTGATTTTATTCCAACAACTATTTTGACTAAGTGATGAGTTGCTTAGTGTGTATGTATAGAATTTTAAGGAGG TAATGTATATTTATTAAGAGGGGCTGTAATATATTTATTGTTTTTTGGGTGAGGAAGTTAGATTTCTGTCTTGGGAAGATAATGTGTTGTGCTGTAGTGA TTTTTGTTTTGATAATATTATGTATATTCATTTTATTATGCATGTAGAATTATAAATAGAGTGC
• Tissue: pods
• Gene name: LI_gene_189523;
• Additional information: details;

Expression of Ll_transcript_473352

FPKM

• PAB: 11.7
• PNAB: 10
• PS1: 8.6
• PS2: 7.3
• PS3: 9.1
• PW1: 31.4
• PW2: 15.3
• PW3: 4.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_473352

• Blastp: Large proline-rich protein BAG6 from Mus with 38.1% of identity
• Blastx: Large proline-rich protein BAG6 from Mus with 38.1% of identity
• Eggnog: tail-anchored membrane protein insertion into ER membrane(ENOG410XS9P)
• Kegg: Link to kegg annotations (224727)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449499.1)
• Pfam: Ubiquitin family (PF00240.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;