Ll_transcript_473372

• Id Trinity: TRINITY_DN52033_c0_g1_i21
• Name Transcript: Ll_transcript_473372
• Sequence: GTAACTTCTGGTAGTTTCTTCAACAACGTAATCTTAGAAAAATCATCGCCTCCATATTCGTCGCGACGTTTGGTATCCTTCTTTGTGGGGCTAGTTCTGT GCAATTCCTTGGTCAAAGGCTTTGCGGCTGACCAAATAGCATGGCGGATCAGGGCTCCAATGAAAGCTCCAGTTCTGGCAATATTTCAGCCGAGTTTTCG GATTCAACTCTTCAGCTCAATATCAAGACCCTTGATTCCCGCATCTGTAGTTTTCAAGTGGACAGAAATATGTCTGTTTCATCATTCAAAGAGAAAATTG CCAATGAAACAGGTGTTGCAACGAGCCGGCAACGGCTGATATTTAGAGGAAAAGTATTAAAGGATGAGCACCTTCTTCCTGAGTATCATACATTGCATTT AGTTGAAAGGCAACCAAATCCATCACAGGTTTCCGGTATGAGTTCTGCTGAGCCAACTGTTACAAATGCTAACCAAGGGAATGATGCTGGCTCGGGGGTT CCTGGTAATCGTGTTGGGACGATTTCACACAGTGTTGTTCTCGGGACTATTAATATGGGGGAACAAGGTGACAGCATGGTTCCTGACCTTAATGGGGTTA TTGGGGCGGTCTTGAATTCTATTGGCATTGGTGGCCAGAACAGAAGTAGTGTTTCTAATGCTACACAAACTTCAGCTTCATCAGGGAGTGAAACTGAAGG TGTGCATGCTGGAAATTGGAACCTAGCAGGAAATCAAGCACAGTCTGGACAGACATTTAATGGTCAGGCATTCCAGTCTCTTCCTCAAGTTGTTCAGATT CCTGTCCCGGCGGGGGCCATACCTATTCCTTCGCTTAATGCACCAATCCCTCATTCATTGAACACACTGTCTGAGTTTATAAATAGCATGGAACACACAC TATCACAAGATGGTCATGGGCCAAATCTGTCTTCAACTAACGCCAGAGATCAACAAGTAGAATTGCCAACCAATGCACAAGGGTTGCCTACGCTTGAAGC ATTAAGCACCATTGTGCGTCGCACAGAACAATTGCTTAGTGATCATGCTGTTGCTGCTTTATCTCATATTGCAGGACGCTTGGACCGAGACGGAACTTCT TCTGATTTAAGTATAAGGGGTCAAATTCAGTCAGAATCGGTGCAAACAGGAATTGCTATGCAGCATTTAGGTGCACTTCTTCTCGAGCTTGGCCGAACAA TGTTGACACTGCGTATGGGGCAGTCTTATGCAGAGTCTGCCATTAATGCTGGACCAGCAGTTTATATTTCACCATCAGGACCGAATCCTATAATGGTGCA GCCCTTTCCACTTCAGACAAGCCCCCTCTTTAGCGGTTCTGTTCCTTCTTCAACTCCTACAACTTCTGGCGCTGTCGGTGTTGGAAGTGTTCCTAGGAAC GTAAACATTCATATACATGCTGGTACCTCTCTTGCACCAATTATTTCACCAATTGGTTCTAGGCCAAATAATGGGGATGGGATAGCAGGTGAACTCCATA GTGAGCCTGCCTCTGGTGTTGGAGTTGCTAGCAGCACACAAACTGGGTTTGGTCTTTCTACTTCACAGCCACCTTCTGATCCAACTCCATTATCACCATC AGTTGTAGCTGAAATCACTTCTCACATTAGTGACATTCTTGGTGATATGCAAAGAGATAACACAGAGCTGTCATCTTCTGATCCAACTACATTGTCATCG TCAGTTTTAGATGAAATCAATTCTCACCTTAATAACATTCTTGGTAATATGCAAGGAGATAACACAGATCTGTCAGGTCAAATAGAATCAACTAGTCGGC ATTTGCCTGCCAGTTCTGAATCACGGCCTGCACCGGGAAACCAACAGCTAGGTACCATGGAGGTGAATGGCCTTGGGGTATCCTCGGTTGGTTGTACTTC TGAAAGTGGAGTACAGAAGCCCCAAACAGAGGCAGCACAAACCTGTTATAGTGACGAGAGAGATGATTCGGTTGACAAATTTGTTTCTGACCAAGTTTCT TCAAGCGGAGAAACAATAACAAAATCATACAAAGTACAAGGTGCTCCATCTGTAAGTGAAGAACGAGATGCAACTGAACCTGCCAAAGCTGCTCCATTAG GATTGGGTATGAGTGGTCTGGAGCGTAAAAAGCGAACTCGCCCTCAACCTCCTGCAAGCAAGGGTGCTGATGGTGAACTATCTGGTTCTTCTGCCAATCA AAGTCATCAAACTAGAACAGATGGTCAACAAATATTGCGAACTCTTGCCAGTCATGGATCTGCTCTGAATTTGAGAAACCCTAATGGGCCATCCCAGCAG CCTTTGCCCTCTGGTGATAACCAGATTGATATGGCTGGTTTAATGTCTCAGGTTTTGCATAGCCCTGCTATGAATGGTTTGTTGTCAGGGGTTTCACAGC AAACTAGAGTTGACTCACCTGATGGCTTGAGGAATATGTTGCAACAGTTCACACATAATCCTCAGATGATGAACACAGTCAATCAAATTGCTGAACAGGT TGGCAGCGAGGATATTGAAAATATGTTTTCTGGAATGGAAAGAGGGCAAGGCGGCGGTATTGACTTGTCAAGGATGTTTCAACAAATGATGCCAATTGTA TCTCGAGTCCTTGGTGGGGGAAGTCCTCCCCCACTCTTCTCTGCAGCAGAACCACAGCCCCAGGCTCCCCACAGAGATGAAAATTCTTATAACGGAAGTT TACAGCTTGACCTTCAACCATTGGTAGAGAGGATTGAGCGCCGGAGTTCACCCACGGATGTTTTCCGTGCTGTCGCTGAAAATGCTATCCATGTATCTGG CAATGAAAGTGCTTCTAATGATCTTCTGGATGAGTTATGCAGCAATGAGAGTCTTATCGGTGAATATGTGAAGATGTTGCGAAATGATGTAAAGCAACGA TGCAAGGGGCATTCTGAGTTGGACAAGTCCTAATTCCAGCATGTGTGGATATGTATTTCCTGCTTCACTTTCTATTTTATGTCATAACTCCAATCCTTTC TGAAAGTCCTTCCATGAATTAAATGATTAATTGGTCTGGATAATTTTCACTGACTTCCAGATCGTTTGAAAATTTAGTATACACTATATGCCTGATAGTT GGTTCAAATGTATCATTGAGGTGTTTAGTTGCCTCCACTGTCATATATTTATGTCCTTTTGACTATATATCATCTTTTATCCTCAATTTAGAATTTCAGA CAATGGATGATGTTTTAACGTAATATGACTTCATTGACTTGTG
• Tissue: pods
• Gene name: LI_gene_189523;
• Additional information: details;

Expression of Ll_transcript_473372

FPKM

• PAB: 0
• PNAB: 0
• PS1: 1.3
• PS2: 0.8
• PS3: 1
• PW1: 1.1
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_473372

• Blastp: Large proline-rich protein BAG6 from Mus with 36.42% of identity
• Blastx: Large proline-rich protein BAG6 from Mus with 36.03% of identity
• Eggnog: tail-anchored membrane protein insertion into ER membrane(ENOG410XS9P)
• Kegg: Link to kegg annotations (224727)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413709.1)
• Pfam: Ubiquitin family (PF00240.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;