| Id Trinity | TRINITY_DN52033_c0_g1_i23 |
|---|---|
| Name Transcript | Ll_transcript_473374 |
| Sequence | GTAACTTCTGGTAGTTTCTTCAACAACGTAATCTTAGAAAAATCATCGCCTCCATATTCGTCGCGACGTTTGGTATCCTTCTTTGTGGGGCTAGTTCTGT GCAATTCCTTGGTCAAAGGCTTTGCGGCTGACCAAATAGCATGGCGGATCAGGGCTCCAATGAAAGCTCCAGTTCTGGCAATATTTCAGCCGAGTTTTCG GATTCAACTCTTCAGCTCAATATCAAGACCCTTGATTCCCGCATCTGTAGTTTTCAAGTGGACAGAAATATGTCTGTTTCATCATTCAAAGAGAAAATTG CCAATGAAACAGGTGTTGCAACGAGCCGGCAACGGCTGATATTTAGAGGAAAAGTATTAAAGGATGAGCACCTTCTTCCTGAGTATCATCTCGAAAATGG AGATACATTGCATTTAGTTGAAAGGCAACCAAATCCATCACAGGTTTCCGGTATGAGTTCTGCTGAGCCAACTGTTACAAATGCTAACCAAGGGAATGAT GCTGGCTCGGGGGTTCCTGGTAATCGTGTTGGGACGATTTCACACAGTGTTGTTCTCGGGACTATTAATATGGGGGAACAAGGTGACAGCATGGTTCCTG ACCTTAATGGGGTTATTGGGGCGGTCTTGAATTCTATTGGCATTGGTGGCCAGAACAGAAGTAGTGTTTCTAATGCTACACAAACTTCAGCTTCATCAGG GAGTGAAACTGAAGGTGTGCATGCTGGAAATTGGAACCTAGCAGGAAATCAAGCACAGTCTGGACAGACATTTAATGGTCAGGCATTCCAGTCTCTTCCT CAAGTTGTTCAGATTCCTGTCCCGGCGGGGGCCATACCTATTCCTTCGCTTAATGCACCAATCCCTCATTCATTGAACACACTGTCTGAGTTTATAAATA GCATGGAACACACACTATCACAAGATGGTCATGGGCCAAATCTGTCTTCAACTAACGCCAGAGATCAACAAGTAGAATTGCCAACCAATGCACAAGGGTT GCCTACGCTTGAAGCATTAAGCACCATTGTGCGTCGCACAGAACAATTGCTTAGTGATCATGCTGTTGCTGCTTTATCTCATATTGCAGGACGCTTGGAC CGAGACGGAACTTCTTCTGATTTAAGTATAAGGGGTCAAATTCAGTCAGAATCGGTGCAAACAGGAATTGCTATGCAGCATTTAGGTGCACTTCTTCTCG AGCTTGGCCGAACAATGTTGACACTGCGTATGGGGCAGTCTTATGCAGAGTCTGCCATTAATGCTGGACCAGCAGTTTATATTTCACCATCAGGACCGAA TCCTATAATGGTGCAGCCCTTTCCACTTCAGACAAGCCCCCTCTTTAGCGGTTCTGTTCCTTCTTCAACTCCTACAACTTCTGGCGCTGTCGGTGTTGGA AGTGTTCCTAGGAACGTAAACATTCATATACATGCTGGTACCTCTCTTGCACCAATTATTTCACCAATTGGTTCTAGGCCAAATAATGGGGATGGGATAG CAGGTGAACTCCATAGTGAGCCTGCCTCTGGTGTTGGAGTTGCTAGCAGCACACAAACTGGGTTTGGTCTTTCTACTTCACAGCCACCTTCTGATTCAAC TCCATTATCATCTGTTTTAGCTGGACTCAGTTCTGGCCTTAGAGATTTTGTTGGCAATATGCAAGGAGATCACACAGTTGTGTCAGGTCAAACAGAATCA ACTAGTCGAGACTTGTCTGCTGGTTCTGATTCTAGACCTGCACAGGGAAACGAACAGCGAGATACCACTGAAATGAATAGCTTCAGGGATGCTAGTCTAT CCTCAGTTGGTTGTACTTCTGAAAGTGGTATACAGAAGCCCCAAACAGAGACAATCCAAACCCATAGTAGTGACGAGAGAGATGTTTCCGTTGATAAATT TGTTTTTGATCAAGGTTGTTCAAGTGGAGAAACGATAGCAAAATCAGAAAAAGTACAAGGTGCTCCATCTGTAAGTGAAGAACGAGGTGTAATGGAAAGT GCCAAAGCTGCTCCATTAGGATTGGGTATGAGTGGTCTGCAACGTAAGAAGCGAACTCAACCTCAACCTAGTGTAAGTAAAGGTGGTGGTGATGGATCAT CTGGTTCTTCTTCCAATCAAAATAGAACAAATGGTCAACGTATATTGCAAACTCTTGCCAGTCATGGATCTACTGTGACTTTGAGAAATCCCAATGGGGG ATCCCAGCAGCCCTTGCCCTCTGGTGATAGCCAGAATGATATGACCAGTTTAATGTCTCAGGTTTTGCATAGCCCTGCTATTGGTGGTTTGTTGTCAGGT GTTTCACAGCAAACAGGAGTTGACTCACCTAATGGCTTGAGGAATATGTTGGAACAGTTCACACAGAACCCACAGATGATGAACACAGTCAATCAAATTG CTGAACAGGTTGGCAGCGAGGATATTGGGAATATGTTTTCTGGAATGGAAAGTGGGCAAGGAGGTGGTATCGACTTGTCAAGGATGTTTCAACAGATGAT GCCAATTGTATCTCGAGTTCTTGGTGGGGGAACTCCTCCCTCACTATTCTCTACTGCAGAACCACAGCCCCAGGCACCCTACAGAGATGATCATCAAAGT TTACAGGTTTGTATGCAAGTGTTAATAAAGGAAAGGCCTTGGTTGTATTACTGCACTTGTTTTCTAATTTCTGTGGGTTGTTAACAAAACTAGATTATTG TTGGCTACTTGGGCAGCAATTTAGAGTGGACATGCTGAGAAAACTTGAGCGGTATTACCATGTTGTACTTTTGTGTTTGTGACATCATGCCGTTTATTTG GTTTCTTTGTATGATTTGTGTATGTAGCATTTGCCGATACTTGATAGAAGACTAATATACTTCTACAATTTAACTTAATTGCCTTGGGGAGTGGGAATTC TAAGCCCTGCTTGGAGCATGCTCATCCCTTCTAACACCCCCGCAAGTGATATTCGGCTGCAGGCACCATATCAAAATATATCTTTTGTCCTTAGCGATGA AGTCGGGAAATAAGGGGATTATGGCGATATCGTTTAGGAAGTGACCTTTTAAAGGAGAAAGGCTAAATTCCATCTTCTCGTTGTGATCTCATTTGCCCAT ATGTCATGAAAGCCCTCCTTCCTTACTCCAGCTGTCCTAAACATTAAATTCTGATCATTTTGTATTTGGTTTACTGTCAAAACTTATTCCTACTTGTTTT AGATATTTATTTCATAAAAATTACATGCATAATTGCTGCCCGTTGATAAGAATCTTGAGGTAGATATTTTGTTGAAAGCTGATAAAATGAAGCATACCTA CTTGATTTTGGGATGTTACCATTTGTGTTTATACACTATGTTGTTAGATGGAACTATCAAAATGGTCCTGGAATCTGGGCCAGTCTGTATAACCCATGTT CCGAGGAGGTTTAGGCCTATGAGTTTGAACTTGAAGGCCAATTTGACTTGGCCAGATGGCTTATTTAGCATGTGGACCAACCTGTTATTTATATTTATTT ATTTTCAGCTCTTTAGTTGAATTATTAGGTCAGTTAAACGGACCGGCAGCTGTTTAAACCACTATCCATTTAGGGATTGTATAGGGTCCTTCATTGTTGT TAGCACTTTCTTGCTTGATCCACCCTGCGTTAGGTCAGACCAGGCTGGCCTATTTTGACCCTCCATGTTGCATGGCATGTATTTTTTCTCTATTCTGTTA GCAATTTCTTATTTTCATGTATAAGTAGGATATGATTATGCCTATTGCCCTAGGTTTGGTTCATTGTTACCTTACAAAATAGCCAAACGAAAACTTCAGC CGCTCATCAACTATACCATAGGGGGAATGACATTTGAAGTCCTTAATGGATAAAGTGATGTGCTAAAAACCAAAGGGCTACTCAATTCCTTTGTGTATTT TACACCTCTGGTCGTATATTGATTTTTTGGAAAATGGATACAAGTGATGTTCATAATATTGTGAATTGTGAAGAACTTCTAAAAAATAGCTTTCATTTCG TAAATGAATGTAGACCACCTTAGAATCATCCATTTTTTTTCTCGTAAATTGAAATGCTGAAATAGTGTTTCTCTTTTGACCATTTCCTTATCCTCTTTAT ATTCCAGCTCGACCTTCAACCAGCAGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_189523; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_473374
| Blastp | Large proline-rich protein BAG6 from Mus with 36.84% of identity |
|---|---|
| Blastx | Large proline-rich protein BAG6 from Mus with 36.5% of identity |
| Eggnog | tail-anchored membrane protein insertion into ER membrane(ENOG410XS9P) |
| Kegg | Link to kegg annotations (224727) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453371.1) |
| Pfam | Ubiquitin-2 like Rad60 SUMO-like (PF11976.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |