Ll_transcript_473381

• Id Trinity: TRINITY_DN52033_c0_g1_i29
• Name Transcript: Ll_transcript_473381
• Sequence: GTAACTTCTGGTAGTTTCTTCAACAACGTAATCTTAGAAAAATCATCGCCTCCATATTCGTCGCGACGTTTGGTATCCTTCTTTGTGGGGCTAGTTCTGT GCAATTCCTTGGTCAAAGGCTTTGCGGCTGACCAAATAGCATGGCGGATCAGGGCTCCAATGAAAGCTCCAGTTCTGGCAATATTTCAGCCGAGTTTTCG GATTCAACTCTTCAGCTCAATATCAAGACCCTTGATTCCCGCATCTGTAGTTTTCAAGTGGACAGAAATGTGATCTATAATCTCCTTTCCTGCTGTTCTA ATGTTTTCAAGTCCTTTTTGTGATAGTATCTGTAAACTAGAGTATAACTAAAACTGTTCTTCCAAATTATTCCAGATGTCTGTTTCATCATTCAAAGAGA AAATTGCCAATGAAACAGGTGTTGCAACGAGCCGGCAACGGCTGATATTTAGAGGAAAAGTATTAAAGGATGAGCACCTTCTTCCTGAGTATCATCTCGA AAATGGAGATACATTGCATTTAGTTGAAAGGCAACCAAATCCATCACAGGTTTCCGGTATGAGTTCTGCTGAGCCAACTGTTACAAATGCTAACCAAGGG AATGATGCTGGCTCGGGGGTTCCTGGTAATCGTGTTGGGACGATTTCACACAGTGTTGTTCTCGGGACTATTAATATGGGGGAACAAGGTGACAGCATGG TTCCTGACCTTAATGGGGTTATTGGGGCGGTCTTGAATTCTATTGGCATTGGTGGCCAGAACAGAAGTAGTGTTTCTAATGCTACACAAACTTCAGCTTC ATCAGGGAGTGAAACTGAAGGTGTGCATGCTGGAAATTGGAACCTAGCAGGAAATCAAGCACAGTCTGGACAGACATTTAATGGTCAGGCATTCCAGTCT CTTCCTCAAGTTGTTCAGATTCCTGTCCCGGCGGGGGCCATACCTATTCCTTCGCTTAATGCACCAATCCCTCATTCATTGAACACACTGTCTGAGTTTA TAAATAGCATGGAACACACACTATCACAAGATGGTCATGGGCCAAATCTGTCTTCAACTAACGCCAGAGATCAACAAGTAGAATTGCCAACCAATGCACA AGGGTTGCCTACGCTTGAAGCATTAAGCACCATTGTGCGTCGCACAGAACAATTGCTTAGTGATCATGCTGTTGCTGCTTTATCTCATATTGCAGGACGC TTGGACCGAGACGGAACTTCTTCTGATTTAAGTATAAGGGGTCAAATTCAGTCAGAATCGGTGCAAACAGGAATTGCTATGCAGCATTTAGGTGCACTTC TTCTCGAGCTTGGCCGAACAATGTTGACACTGCGTATGGGGCAGTCTTATGCAGAGTCTGCCATTAATGCTGGACCAGCAGTTTATATTTCACCATCAGG ACCGAATCCTATAATGGTGCAGCCCTTTCCACTTCAGACAAGCCCCCTCTTTAGCGGTTCTGTTCCTTCTTCAACTCCTACAACTTCTGGCGCTGTCGGT GTTGGAAGTGTTCCTAGGAACGTAAACATTCATATACATGCTGGTACCTCTCTTGCACCAATTATTTCACCAATTGGTTCTAGGCCAAATAATGGGGATG GGATAGCAGGTGAACTCCATAGTGAGCCTGCCTCTGGTGTTGGAGTTGCTAGCAGCACACAAACTGGGTTTGGTCTTTCTACTTCACAGCCACCTTCTGA TCCAACTCCATTATCACCATCAGTTGTAGCTGAAATCACTTCTCACATTAGTGACATTCTTGGTGATATGCAAAGAGATAACACAGAGCTGTCATCTTCT GATCCAACTACATTGTCATCGTCAGTTTTAGATGAAATCAATTCTCACCTTAATAACATTCTTGGTAATATGCAAGGAGATAACACAGATCTGTCAGGTC AAATAGAATCAACTAGTCGGCATTTGCCTGCCAGTTCTGAATCACGGCCTGCACCGGGAAACCAACAGCTAGGTACCATGGAGGTGAATGGCCTTGGGGT ATCCTCGGTTGGTTGTACTTCTGAAAGTGGAGTACAGAAGCCCCAAACAGAGGCAGCACAAACCTGTTATAGTGACGAGAGAGATGATTCGGTTGACAAA TTTGTTTCTGACCAAGTTTCTTCAAGCGGAGAAACAATAACAAAATCATACAAAGTACAAGGTGCTCCATCTGTAAGTGAAGAACGAGATGCAACTGAAC CTGCCAAAGCTGCTCCATTAGGATTGGGTATGAGTGGTCTGGAGCGTAAAAAGCGAACTCGCCCTCAACCTCCTGCAAGCAAGGGTGCTGATGGTGAACT ATCTGGTTCTTCTGCCAATCAAAGTCATCAAACTAGAACAGATGGTCAACAAATATTGCGAACTCTTGCCAGTCATGGATCTGCTCTGAATTTGAGAAAC CCTAATGGGCCATCCCAGCAGCCTTTGCCCTCTGGTGATAACCAGATTGATATGGCTGGTTTAATGTCTCAGGTTTTGCATAGCCCTGCTATGAATGGTT TGTTGTCAGGGGTTTCACAGCAAACTAGAGTTGACTCACCTGATGGCTTGAGGAATATGTTGCAACAGTTCACACATAATCCTCAGATGATGAACACAGT CAATCAAATTGCTGAACAGGTTGGCAGCGAGGATATTGAAAATATGTTTTCTGGAATGGAAAGAGGGCAAGGCGGCGGTATTGACTTGTCAAGGATGTTT CAACAAATGATGCCAATTGTATCTCGAGTCCTTGGTGGGGGAAGTCCTCCCCCACTCTTCTCTGCAGCAGAACCACAGCCCCAGGCTCCCCACAGAGATG AAAATTCTTATAACGGAAGTTTACAGCTTGACCTTCAACCATTGGTAGAGAGGATTGAGCGCCGGAGTTCACCCACGGATGTTTTCCGTGCTGTCGCTGA AAATGCTATCCATGTATCTGGCAATGAAAGTGCTTCTAATGATCTTCTGGATGAGTTATGCAGCAATGAGAGTCTTATCGGTGAATATGTGAAGATGTTG CGAAATGATGTAAAGCAACGATGCAAGGGGCATTCTGAGTTGGACAAGTCCTAATTCCAGCATGTGTGGATATGTATTTCCTGCTTCACTTTCTATTTTA TGTCATAACTCCAATCCTTTCTGAAAGTCCTTCCATGAATTAAATGATTAATTGGTCTGGATAATTTTCACTGACTTCCAGATCGTTTGAAAATTTAGTA TACACTATATGCCTGATAGTTGGTTCAAATGTATCATTGAGGTGTTTAGTTGCCTCCACTGTCATATATTTATGTCCTTTTGACTATATATCATCTTTTA TCCTCAATTTAGAATTTCAGACAATGGATGATGTTTTAACGTAATATGACTTCATTGACTTGTG
• Tissue: pods
• Gene name: LI_gene_189523;
• Additional information: details;

Expression of Ll_transcript_473381

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 0.2
• PS2: 0.6
• PS3: 0.5
• PW1: 0
• PW2: 0.4
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_473381

• Blastp: Large proline-rich protein BAG6 from Mus with 36.21% of identity
• Blastx: Large proline-rich protein BAG6 from Mus with 34.06% of identity
• Eggnog: tail-anchored membrane protein insertion into ER membrane(ENOG410XS9P)
• Kegg: Link to kegg annotations (224727)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413709.1)
• Pfam: Ubiquitin-like domain (PF14560.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;