Ll_transcript_472290

• Id Trinity: TRINITY_DN52035_c2_g3_i2
• Name Transcript: Ll_transcript_472290
• Sequence: TTCAAATTCCCAATCCTGTGCAAATTGTAGAAGAAGAAGAAGAAGAAGAAGACGATGATTGAGATTCCATATTTGACCGCATTAACCACTTATTTCAGCT ATGGATTACTCTTCGCTTTTGGTCAATTCAGAGATTTCTTCAGAAAATTCTTCGATTGGTTCACCTCCAACAATCTTCACGGATACGCACCAATCTGCTT AGGACTCGAAGATTTTTATATTCGAAGATTATACCTTCGTATTCAGGACTGTTTTGGAAGACCAATATCGAGTGCTCCTGATGCTTGGTTCGATGTAGTT GAACGCTTCTCCAATGATAATAACAAGACCTTAAAACGAACCGATAGAGTATGTCGATGCCTTAACCTGGGATCATACAACTATCTTGGTTTTGCTGCCG CAGATGAATACTGCACACCTCGAGTAGTTCAGTCATTGGAGCAATATTCTCCCAGCACATGCAGCACCCGGGTGGATGGAGGCACAACTGCTCTTCACAA TGAATTGGAGGAATGTGTTGCATCCTTTGTTAGAAAGCCAGCTGCTTTAGTTTTTGGTATGGGCTATGTGACAAACTCTGCTATTCTTCCTGTCTTGATG GGGAAGGGGAGTTTGATTATTAGTGATTCGTTGAACCACAATTCAATTGTTAATGGTGCACGAGGATCTGGAGCGACTATTCGTGTTTTTCTACACAATA CACCACAACATCTAGAAGAAGTATTAAGAGAACTAATTGCTGAGGGACAGCCAAGGACCCATAGGCCTTGGAAGAAGATAATGGTTATAGTGGAGGGGAT ATACAGCATGGAAGGGGAGCTTTGCAAGCTTCCAGAGGTCATAGGTATCTGCAAAAAGTACAAGGTATATACATATTTGGATGAAGCACACAGCATTGGA GCAGTGGGCAAGACAGGGAGGGGTGTTTGTGAGCTCTTGGATGTGGATACTGCCGATGTTGACATTATGATGGGAACATTCACAAAATCATTTGGGTCAT GTGGAGGCTATATCGCAGGATCTAAGGAACTTATCCAGTACTTGAAGTACACCTGCCCTGCTCATCTTTATGCGACTTCAATTTCACCACCAGCTGCCCA ACAAATAATATCATCCATAAAGGTTATTCTTGGAGAGGATGGTTCCAATAGAGGCGCCCAGAAACTTGCACAAATTCGAGAGAATAGCAACTTTTTCAGA TCAGAGTTACAGAAGATGGGATTTGAGGT
• Tissue: pods
• Gene name: LI_gene_189542;
• Additional information: details;

Expression of Ll_transcript_472290

FPKM

• PAB: 1.4
• PNAB: 4.4
• PS1: 4.3
• PS2: 2.1
• PS3: 2.5
• PW1: 1.7
• PW2: 1.9
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_472290

• Blastp: Long chain base biosynthesis protein 2a from Oryza sativa with 83.38% of identity
• Blastx: Long chain base biosynthesis protein 2d from Oryza sativa with 83.12% of identity
• Eggnog: 8-Amino-7-oxononanoate synthase(COG0156)
• Kegg: Link to kegg annotations (4350591)
• CantataDB: Link to cantataDB annotations (CNT0000176)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442913.1)
• Pfam: Aminotransferase class I and II (PF00155.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;