Ll_transcript_472305

• Id Trinity: TRINITY_DN52035_c2_g3_i8
• Name Transcript: Ll_transcript_472305
• Sequence: GGAATATTCAAACCAATCATTTCAAACTTCAGATCTCTCACACGCACTTTCCAAATATAGTAACCACATTCTTCTTCTCATCGCCATTTTCAAATTCCAT TACAAATCAAACATCATGATTGCAATTCCATATTTGACCGCATTAACCACTTATTTCAGCTATGGATTACTCTTTGCGTTTGGTCAATTCAGAGATTTCT TTCGTAAAATCTTCGATTGGTTTCGCTACAACAATCTTCATGGTTATGCACCGATATGCTTAGGACTCGAAGATTTTTATATTCGCCGATTATACCTTCG TATTCAGGTTTTGTCATTTTTCTTCTTCTTTTAATTTACCAAATTCTCGTGTACCTGTTTTGGTTTATATTGAGTTCTCTGATTTGCTTGAGATTTATAT TAAAGAGAATCATGTGATAGTAATGTAAAAAGAAATGAAGGACTTTGTCAAAAGACATCTCAGTTTGCAGAATTGCGAGACTTTCTCAAGTGTTTGGTAT AAATTGTTTTTTTAAATTTTGACTATAAACTGAAAAATAAATCAACCCATTTTTTGGAACATGATACTTTTTGCTTTTTATCTATTTATTTATAATTTTT TTTCCATAAACTAACCTTGTTACCAAGTAAAAAAGAATCCAAACCAAATATGTTTTGAGTTAGGGATAATAATGAAAATCGAACCGTCTAAATCCAACCT GAATTTAACGAGTAAAACCCGACATGAATTGTTTGGGTTTTACACGAGGTCAACTTTGGGGTTTGGTTTTGGTATAGTTGATACCCTACCGCGAACCTAA TCCATATATGTACAGTTACAAAATTAGACATGAATACATACATAAATCCTATATATATATAGAGAAATTTGAGACATATATAGGACCTATATATATGTGT AAATATATGTTTTAGGTGGGTTCTCATCAGTTTCGGGTTACCCGAAACCAGACGAGTGCGGGCATGGTAGTATTGTTTTGAACCCCACTTAATTTGGGTT TTGGATTTCGAGTTAGGAGTTGGATAAGCACAAACCCGACCCGATCTGCCCCATTGTCATTCCTACTTTGAGCACATGGGTTCAAACCCGGGAAGCTGCA CAATTTCTCCTCCACTTTTCGGTTAAAAACTTTCCCTGTAAAAAAAATAATCGCGTTGGCTTACCAGGTATAACTTTGTGCCGAGGTGATCCAATAGCTG GACGATGTAACTAGAAAAACACAGGCTTTGTATGTTTGTGATGGTCACTGTTGAATCATGTGGTTATGACTTATGAAGATTATAAAGTGGTTGATTTAAA GATTGCTTTATGGCAGGACTGTTTTGGGAGACCAATATCGAGTGCTCCTGATGCTTGGTTCGATGTAGTTGAACGCTATTCCAATGATAATAACAAGACC TTGAAGTAAAACTCCTTTATCTAAATTTGAGGCTAATGATTTTTTTCTTCCTTTTTTGAGGAGGGGTTTTTGAGAAATATTAGCAACAAACTATCTTCAA CACAGTCTTTATTGTTGGTGGAGTTCATATGAGATCCATTAAATTACATGGGTACAGTCTCTATTTAGTAGGTCCCACATGAACTTAATGTATTGAATGT AGTTTTCTGTTTGCTCACTCTTTCTGAAATATCAATTTACAAGCCAATAATAGTTATACTTGTTGATCAGAAGTTTTTGTTGTCTTTTCTCCTGATGCAG ACGAACCGATAAAGTAAGTCGATGCCTTAACCTGGGATCATACAACTATCTTGGTTTTGCTGCTGCAGATGAATACTGCACACCTCGAGTAGTTGAGTCA TTGGAGCAGTATTCTCCAAGCACATGTAGCACCAGAGTGGATGGGGGCACGACTGCTCTTCACAATGAATTGGAGGACTGTGTTGCAAGCTTTGTTAGAA AGCCAGCTGCTTTAGTTTTTGGTATGGGATATGTCACAAACTCTGCTATTCTTCCAGTCTTGTTGGGGAAGGGAAGTTTGATTATCAGTGATTCATTGAA TCACAATTCAATTGTTAATGGTGCACGAGGATCCGGAGCAACTATTCGTGTTTTTCTACACAATACACCACAACACCTAGAAGAAGTATTAAGAGAACTC ATTGCTGAGGGACAGCCAAGGACCCATAGGCCTTGGAAGAAGATAATGGTTATAGTGGAGGGAATATACAGCATGGAAGGGGAGCTCTGCAAGCTTCCGG AGATCGTAGCTATCTGCAAAAAATACAAGGTATATACATATTTGGATGAAGCACATAGCATTGGAGCAGTGGGCAAGACAGGGAGGGGCGTTTGTGAGCT ATTGGATGTGGATACTTCTGATGTTGACATTATGATGGGAACATTCACCAAATCATTTGGGTCTTGCGGAGGCTATATCGCGGGATCTAAGGAACTAATC CAATACTTGAAGTACACTTGCCCTGCTCATCTTTATGCGACTTCAATTTCACCACCAGCTGCACAACAAATAATATCATCTATAAAGGTTATTCTTGGAG AGGATGGTTCCAATAGAGGTGCCCAGAAACTTGCACAAATTCGAGAGAATAGCAACTTTTTCAGATCAGAGTTACAGAAGATGGGATTTGAGGTTCTTGG GGATAATGATTCTCCTGTAATGCCAATCATGCTTTACAACCCAGCCAAAATCCCTGCCTTCTCAAGGGAGTGCCTCAGACAGAACGTTGCTGTTGTGACT GTGGCATTTCCTGCAACCCCACTGCTACTGGCTAGAGCACGCATATGCATATCTGCTTCTCATTCAAAGGAAGACCTTGTGAAAGCCTTGCAGGTAATCA GCAGAGTGGGTGATCTAATTGGCATAAAATACTTCCTTACTGAACCAATAAAGCAGAAGTTTGATTGAGAGAGAAGTTTGTCTAGCACAAAGTGGAGCTA AGTATAATAAAGATAAAGCTGTAATGATAAGAAGCCATTTTTGTTTTCATTGTGGTGGATAGGCTTCAACCTAACTAGAATTTTTTACTGTGTATAAATT TGTTGTCTTCTTCAAAAAGTGGACTTTGCTTGGAGATGCAGATCTACATAATCTTTGTTCAAGGGGAATATCTTGTTGGAGGGAAGTCTTTAATAATTAT AGTCCCCTGGTTATTCATTTGAAAATGAATCTAGGATTTTAATCAAGTTGTAAAATTGAAGTTGGGTATTTCATATTTTTGGTTGTAATGTTTAACTTCA CTATCCTTTGGGAAGTGTATAGAATGGTATGCCATAGATTATGTCTCTGATTTTTGTTTTGGACATATTTTCTTCAAAAGATTACTGTTAATATCCTATT TGCTCAATGGGATATTGGCTACATTATTCTCTTTGCTGATTTTGTATAAATTGACACAATAAGTCTTCCCAGGCTGCTGACTCTTCACCATTGACATGAT GCTGCTTTAGTTCTCAA
• Tissue: pods
• Gene name: LI_gene_189542;
• Additional information: details;

Expression of Ll_transcript_472305

FPKM

• PAB: 0.2
• PNAB: 0.4
• PS1: 0.8
• PS2: 0.3
• PS3: 0.6
• PW1: 0
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_472305

• Blastp: Long chain base biosynthesis protein 2a from Oryza sativa with 87.1% of identity
• Blastx: Long chain base biosynthesis protein 2a from Oryza sativa with 84.94% of identity
• Eggnog: 8-Amino-7-oxononanoate synthase(COG0156)
• Kegg: Link to kegg annotations (4350591)
• CantataDB: Link to cantataDB annotations (CNT0000176)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442913.1)
• Pfam: Aminotransferase class I and II (PF00155.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;