Ll_transcript_474634

• Id Trinity: TRINITY_DN52037_c0_g3_i7
• Name Transcript: Ll_transcript_474634
• Sequence: ATAAAAGATTATAGAGTGGTGTGAATGACACCAACATGAACATGAACATGAACATGAACATGTTCTCCAACTCCAGTTCCATTACACATGGACTTGCTTC TTCCTTCACAACTTTCCCAGTTACTAGAATTACTAATGTTCTTCTCAATCCAAATGCAAAATCCCACACCATCTTTTCTCTCAACCTCTCCATCATGAGT TCATATATTCTCTCTAATCCAACTAGAACAACTCTCACACTCAGACCCCTCAATAAGCCAATTTCAGCTACTAACTCAGGTTTAGAAGCATCAATTACTG ATTCCAAGGACGATTCCGTCACCATAACAGATGCTAAAATAGTTGCAGAACCCGGGGATGAAAATAAGACACAACTAAGAGTAGACTTGACCGGTGATCA AACACGAAAGATATTTGACAAGATGCTTGTAAAATTGGGTCGTACTGCCCCACCTGTTCCTGGATTTCGCATGCGTAAAGGAGGAAAATCATCGAAGATC CCAAAAGACTTCCTTGTACAGATGCTTGGGGAAGAACGTGTCACTACGTTTGTAATACAAGAAATACTGAATTCTACCATGGCTGACTATGCAGAAAAGG AAAACTTGGATGTGAAGGACATAAAGATAAGCACAACTCAAACAGCAGAACAACTCAAAAAATCATTCAAACCTGGAAGTGAATTCGGCTTCAATGTTAT AATTGAGCCTGAAAACTCACAAGATTCTAGTTAAATTCGCTGCACGGCGAACTTGTTTCAAGGGATCTAGTGGTTTAAGGCTAATGAGGCAACATGAGAT GTCTCATTGGAAATTGATATACAGCTTGAAGAGTTATGTTTAAGGTTGAGTTCAGTGTACTCATAAAATGGCCTTAAATATGATGCATACTTGAAATTTT GTATGGAGAACTCATCTTTAAATTGTTCATCTTGATTTTAAGGTGATAGTGTGATACCAAACTCAATCTAGAGTGATTAGTTATTGCTTTCTAGTGTTGT GAAATTTCTTCTATACCTATATGTTTCTTGTGAACATATCAATCTTCCTTAGTATAGAATCAACTTAATTACATGTCTTGTGAACAGACT
• Tissue: pods
• Gene name: LI_gene_189554;
• Additional information: details;

Expression of Ll_transcript_474634

FPKM

• PAB: 3.2
• PNAB: 25.7
• PS1: 11.7
• PS2: 10.2
• PS3: 10.6
• PW1: 21
• PW2: 19.7
• PW3: 11.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_474634

• Blastp: Trigger factor from Synechococcus with 24.24% of identity
• Blastx: Trigger factor from Synechococcus with 24.24% of identity
• Eggnog: Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation(COG0544)
• Kegg: Link to kegg annotations (Synpcc7942_2524)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454163.1)
• Pfam: Bacterial trigger factor protein (TF) (PF05697.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;