Ll_transcript_472866

• Id Trinity: TRINITY_DN52042_c0_g1_i3
• Name Transcript: Ll_transcript_472866
• Sequence: CAAGTCCTTAGTGACCTACAAAGAGACTTAGACTCCCACACAATAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGA AAGTTAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGTGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATT TTTTTCAGCACCACACCACACCTATTCCAAAATGGACCACATACTAGGAAGTAAAGCTCTCCTCAGCAAA
• Tissue: pods
• Gene name: LI_gene_189598;
• Additional information: -

Expression of Ll_transcript_472866

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0.6
• PS3: 0
• PW1: 1.1
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_472866

• Blastp: -
• Blastx: LINE-1 retrotransposable element ORF2 protein from Homo with 94.44% of identity
• Eggnog: NA(ENOG410Y9TZ)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_017411387.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;