| Id Trinity | TRINITY_DN52043_c1_g2_i13 |
|---|---|
| Name Transcript | Ll_transcript_474195 |
| Sequence | AGACAGGGGATAAAATTAGTGAGAAACCCTAATCAGTGAAAAAGAATTGGAATATGGTCATTGAGATTTGAGAGTAACTATAATCAGCAACATACCAAAG TAGCAGCTACTGTTAGAAACATGGCTCACGGTGGCTTCAACAAGCGCCGCAGCGTCAACACGGCGAGCCGTCGTCCATCGAACTCGAAGCCGAAAGGGGT AGCGACGAAGAAACCGAAGTCAAAGCCTTCCGTGTCACTCAAAAACCAGATTCGTTCCGCAGAGCGCATGCTCCAAAGAAAGAATTTGCCACCTGAAGTG AGAGAGGCACAAGAACAGAAGTTGGAAGGACTTAAGAAGCAGCAGGAGATTCATACTCGCCTTGCTGCTGAGCGCAAAATATTCTTGCGTGACAAAAAGA TTAAGTTTTTTGAGAGGAGGAAGATAGAAAGAAGAATTAGGCGTCTTGAGAAACAGCACCGTACTTCATCTGTCCCGGCCCAAACTACTGAGGTTGCTGA CCAGCTTGCCAGTCTTAAAAAAGATCTTCAATATGTTATGTACTATCCCAAAACCGAAAAATATCTTCCTTTGTTTACTGGAGGTGATGATTCGGAGATA GCTGACAAGAGAAATGGACTGCGCAAACAGATTGAAGACCGATTAGTTGCAGCTGCAGCAAGTGGCAAGGATTTAGAAGAGACAGGCAGTGAGGATGATG GACTTTTGGACCTGAGTGAAGATGATTTTTTCGTTGGTGGGAGTTCCAGTGATGAAGCAGATGCAGATGATGAATGGACAGACAAAAGCACGAGAGAGCA GGCTTCTAGTGCTTCTGGCAAAGCAGCGTCTGGCATGTCCAGTGATGAAAAAAACCAGAGGCTGATTTCTGCTAGAGCTTTGATGCCTCCTCCTTACCCT TCAAAGAAGAATTTGTCAAGGTTTGGGTCGTCTTCAGGCCAAAATTCATCTATAAAGAGGTCTGAGATTTCCACATCCAGCAACACATCAAATAGCAAAA GCAGCTCAGACTTCAGAGTAAGGGGAGCTTCAGGATTAGGGACGGGTCATGGTAGTAGTTTAAGTTCCAACTCTGATGCTCACAAGCCTCGGAGAAAGAG AAGACCTAAGAAGAAAAAGAATCAGGTTCCTTCTTGTGCTCACTTAGCATATTTTACATCTTTTTTGGAGGCTTCTTATCCTCCTCTTGGCTGCACCTTC CCTTTCCCCCCAACACTGCTCATTATCCAAAATAAATACAGTTTCATTTTGCTCGTAATTCGTAAAGAAAAACCTTTCAGTTTAAACTGTTGTATAGGGC GAAACTGAGTGTAGAAGTTGTTCAGTTAACTTAAATAATTTTGTGGTCATCTGATACATCATGTTGAACTTAAAGTCGAAATTAGTGGTAAGTAATTTAT GACAATATTCCTTTTGTTGGCTGTGTCTGGCTTTGAGTACAGGCAAGCATATAATCTTTGAACTTAATCATACCCAAGAATCACTACATTTGTCATACTA ATGCTACCCAGTTCAGGCACACATAACCTTTACCTCTGCATGTTTGAGATACTTTTGATATATGCCAATTGTGCTTGCAGTCAAATGCTAATGTGTGTAA TGAATAGAATAGAATTCGCCATTTTGCATATTATTGTTAAATCTTTGACTTTCCAATATGCTCTAAGTATTACTTCTATGTGCTTCCGTATGGAATAGAC TTGATTTGGCCACATGACTTGTCACTGCATTCTCTATGCAATAGGATTGGTTAGTAAGGACTAAGGAGGGTAAATATGCAATTAGTTAGAAGTACCAATA GCCTTACCCTTTACAACTTATGGCTCAACATAAATACCTATAGTGTATGTGATTAAGTATTATGTTTTTTACAATAGAACACTTGGTTCCTTGTTTATCA AATACATCCAAATTTACTTACCTCTCTTCTTATCTCTAATGGTAATCCCATATTTATTCTCCTGTTAGGCATGAATGTGAAACCGAGCATTTCTATGACC ACATAGCAATTGGATTTAGCTTCTGTCACATTCATTGGAGATTCTTACAGTTATGTCAGACCTGGATGGATCATATTCACTGGTCATTTTGATGAATCAT ATGCACTGAATTTGTTAGGTTAGATTGAGAATTGGTTACCATAGATCAACTTTTGGGTGGGTTTCTGTAAATTATGTATAAAGCTGATTTGTGTATCCAG GATAGTTTTCTGCTCTTGTAAGATTTCAAGAACCTACCACATTGTCTAATATGATGTGTGAAGAATGTAGGAATGTAGGTGCTACATCTTAATGCACAAG AAATAGAGAACCTTTCTGGAATAATGCTTTTTACACCTGTCTTTTGCTAAAGAATCCATTTAACTTTAGAGTGATATATATATATACGAGGAGGGATCGG TTTACACCCATTTTAAGTTACACTGGTTACACTCAATCTCATCCATTCATTTTTCTTAAATCTAACAGGCCAAATGAGTGATTGAAATAAATGATGAGAG ATAAAATATGAATATTAAATGATTTTGAAATTTCACTCATTTGGTTCGTTATATATAAGAAAATGAATAAATGAGATTTAGTGTAACCGGTGTAACTTAA AATGAGTATAAACCGATCCCTCCTCTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_189602; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_474195
| Blastp | rRNA-processing protein efg1 from Schizosaccharomyces with 35.37% of identity |
|---|---|
| Blastx | - |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPAC12G12.02) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452168.1) |
| Pfam | rRNA-processing protein Efg1 (PF10153.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |