| Id Trinity | TRINITY_DN52045_c5_g2_i16 |
|---|---|
| Name Transcript | Ll_transcript_472557 |
| Sequence | GCAAAAATCAAACACACGACCAACTCTCTCTCTCCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCATG CAATTTTCTCTCTCTTCCCTCTCTAAGGTATGTATTCTATCTCTCTTTCTCTCCCTTATTCAATAATTCTTCCCAAATCTTCATTCTTACCCAACCTTTC AATTCACCATCTTTATGCTTTTACCTCTATTAATTATAGGATTATGCGTAAAGTTTGTCCTTTTTAGCAACTTTTGTCAAATCTTTTTAAATTAATTACG ATTTCTTCCTTGGGGTGTTGTGTTATGTATGCAGGTTAGGTATGAAAGCGATTAGGGATTTCAAAATGACCCCCCATTAATGTTATAATCACTTGGAATC GTTGAATACAAAGTAGAGTTTTTGTTTCTTCATTTTCTTCTAAGAAATAGTACCTTGTTACCTTTAATATTGAAGTTGTAAGATGGGTTATCTCAATTCA GTGTTGTCCTCTTCAACCCAAGTTCATGCTGTTGCTGATGCACCTGTCACCGGTGGTGGACTCAGTCACAATGGCAAATTCAGCTATGGGTATGCTAGCT CTCCTGGCAGGCGATCTTCAATGGAAGACTTTTATGAGACAAGAATTGATGGTGTTGATGGTGAAATCGTTGGCCTTTTTGGAGTTTTTGATGGTATATT TAGTTCTTTCTCTTATCTCTCCGGTATGTACATTGAATGGAAAAGACAACAACAACAAGAACAACAACCAAGCATTAGTCCCAGAGGGGTCAGCTGCCGG CATACATTGAATGGAAAATATGCCAAAATATAAAAAAAATTCTTTTATGATTTTCCCTTTCTTAAAATAATGTGAAGTTAATTGTTTGATGTAACTTGTT GCTTCCATATGTAGATTATTCTATACTTTATGGCTTTATGCACTCATAGAATACATAACTAGCTTTTGTATTTTTGTCCTCCATGGTCAGTCTTTTCTTC TGCTTATATTTTCTCAAATATACATACATACATATATATGGAGGAAAATTTTGGATTTCTTCATAGTTGTGGTCTCCTCACACCTTTGACCTCAAGTCAG TCTAATTGTGGATGGCTTGGTTATTCTGTTTGGTCATAGTATTGTTTTCTGCACACCATAAAGGAAATGTCTTTGATGGTTGCCCATCTAATCAATCTTT CTATGGGCATAATCTCCAGAAGCTTCATCCACCTGTTCTTGTATCCAAACTTCTCCTTAGTATCCTGTTTTGTAAAGTGTGATTAAGGCGTGGTTATTGG TAGTATTCTGTTTTGTGACTTAAGAACCTTCATTTCTTCTTCCATGTGAGCAATTATCAAGTGCAAAGTGTTTCATTATTTGGCATCAGAATCTATTTCT TTCCTAAAGGTTAAGCATGAAGGAATTTTTTCCTATTGGTTATACCAAAATATAAGTATACAACCTATGCTTGATAATGTTTTTATCCTCAGAAAAATAG AAAACAGTTGCAAGCTTCTTGTTTATAACTCTTTCAGGTCATGGAGGTGTCCGTGCTGCTGAGTATGTCAAGCAAAACCTGTTTAGCAATTTGATGAGTC ACCCAAAATTCATTTCTGACACCAAATCAGCAATATCTGATGCATATAATCATACCGACTCTGAGTTTCTGAAATCAGAACATAGTCATAACAGAGATGC TGGGTCAACTGCTTCCACTGCCATTCTAGTTGGTGACCGCTTGCTTGTAGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGTAATGCCATT GCTGTTTCTCGAGATCACAAACCAGACCAAACTGATGAAAGACAAAGGATTGAAGATGCAGGGGGCTTTGTCATGTGGGCTGGAACTTGGAGAGTTGGTG GTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACAACTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGGAGGAAAAGATTGACAGCTCTCTTGA GTTTCTTATATTGGCCAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTTGCTATGGTTAAACCAATTGAGGATGCAGAGGAGGCAGCAAAG ATACTAATGTTAGAAGCATCTAGAAGAGGCAGTGCTGACAATATCACTTGCGTTGTCGTTCGTTTCTCGGCGAACGAAGCCGCTTCTTCCCATAGTAGCT CCGGCTAAGCAACCTTCAAAAGAAGGACTGTAGTGCATTGCTAATGGTTGTGGATCCAAAGATAGGAAGCAAACTCTGTATCTGTTTTACACTAATAAAG AATAGGAAACAAATTCAAACTTGTTATGGTCCTCTATAGCATAGCGCTATTCCTCATTGTTTCAGTTCCATAATTAATTGGACACTATATGTTGCTAGGA AAAAGAGCATGTGTGCAAGGAGTGTAGCCACATTTATATTTGGACATGCTGCAAAATTGGTTCCCATGTAATTTCAATAATGTTACTTATTTCCCTTTCT ATTATTATTACCCCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_189630; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_472557
| Blastp | Probable protein phosphatase 2C 59 from Arabidopsis with 86.21% of identity |
|---|---|
| Blastx | Probable protein phosphatase 2C 59 from Arabidopsis with 88.43% of identity |
| Eggnog | Phosphatase(COG0631) |
| Kegg | Link to kegg annotations (AT4G31750) |
| CantataDB | Link to cantataDB annotations (CNT0001502) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415301.1) |
| Pfam | Protein phosphatase 2C (PF00481.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |