Ll_transcript_472558

• Id Trinity: TRINITY_DN52045_c5_g2_i17
• Name Transcript: Ll_transcript_472558
• Sequence: GCAAAAATCAAACACACGACCAACTCTCTCTCTCCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCA TGCAATTTTCTCTCTCTTCCCTCTCTAAGGTTAGGTATGAAAGCGATTAGGGATTTCAAAATGACCCCCCATTAATGTTATAATCACTTGGAATCGTTGA ATACAAAGTAGAGTTTTTGTTTCTTCATTTTCTTCTAAGAAATAGTACCTTGTTACCTTTAATATTGAAGTTGTAAGATGGGTTATCTCAATTCAGTGTT GTCCTCTTCAACCCAAGTTCATGCTGTTGCTGATGCACCTGTCACCGGTGGTGGACTCAGTCACAATGGCAAATTCAGCTATGGGTATGCTAGCTCTCCT GGCAGGCGATCTTCAATGGAAGACTTTTATGAGACAAGAATTGATGGTGTTGATGGTGAAATCGTTGGCCTTTTTGGAGTTTTTGATGGTATATTTAGTT CTTTCTCTTATCTCTCCGGTATGTACATTGAATGGAAAAGACAACAACAACAAGAACAACAACCAAGCATTAGTCCCAGAGGGGTCAGCTGCCGGCATAC ATTGAATGGAAAATATGCCAAAATATAAAAAAAATTCTTTTATGATTTTCCCTTTCTTAAAATAATGTGAAGTTAATTGTTTGATGTAACTTGTTGCTTC CATATGTAGATTATTCTATACTTTATGGCTTTATGCACTCATAGAATACATAACTAGCTTTTGTATTTTTGTCCTCCATGGTCAGTCTTTTCTTCTGCTT ATATTTTCTCAAATATACATACATACATATATATGGAGGAAAATTTTGGATTTCTTCATAGTTGTGGTCTCCTCACACCTTTGACCTCAAGTCAGTCTAA TTGTGGATGGCTTGGTTATTCTGTTTGGTCATAGTATTGTTTTCTGCACACCATAAAGGAAATGTCTTTGATGGTTGCCCATCTAATCAATCTTTCTATG GGCATAATCTCCAGAAGCTTCATCCACCTGTTCTTGTATCCAAACTTCTCCTTAGTATCCTGTTTTGTAAAGTGTGATTAAGGCGTGGTTATTGGTAGTA TTCTGTTTTGTGACTTAAGAACCTTCATTTCTTCTTCCATGTGAGCAATTATCAAGTGCAAAGTGTTTCATTATTTGGCATCAGAATCTATTTCTTTCCT AAAGGTTAAGCATGAAGGAATTTTTTCCTATTGGTTATACCAAAATATAAGTATACAACCTATGCTTGATAATGTTTTTATCCTCAGAAAAATAGAAAAC AGTTGCAAGCTTCTTGTTTATAACTCTTTCAGGTCATGGAGGTGTCCGTGCTGCTGAGTATGTCAAGCAAAACCTGTTTAGCAATTTGATGAGTCACCCA AAATTCATTTCTGACACCAAATCAGCAATATCTGATGCATATAATCATACCGACTCTGAGTTTCTGAAATCAGAACATAGTCATAACAGAGATGCTGGGT CAACTGCTTCCACTGCCATTCTAGTTGGTGACCGCTTGCTTGTAGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGTAATGCCATTGCTGT TTCTCGAGATCACAAACCAGACCAAACTGATGAAAGACAAAGGATTGAAGATGCAGGGGGCTTTGTCATGTGGGCTGGAACTTGGAGAGTTGGTGGAGTT CTTGCTGTGTCTCGTGCATTTGGTGATAGACTCCTCAAGCAGTATGTTGTTGCTGATCCTGAAATCCAGGAGGAAAAGGTTGACAGCTCTCTTGAGTTTC TTATATTGGCCAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTTGCTATGGTAAAACCTATTGAGGATGCAGAGGAGGCAGCAAAGATGCT AATGTTAGAAGCATCTAAAAGAGGCAGTGCTGACAATATCACTTGTGTTGTTGTTCGTTTCCTGGCGAACCCGGGCGCTCCTTCTCATAGTAGCTCTAGC TAAGCACCCTTTGAAAGAAATTGTTGTGCATTGCTAATGGTGGATCCAAAGATGTGAAGAAATCCCTGTAGCTGTTTACCATTCAAGAGTAGGATACAAA ATGGAACATTATGGTTCTCTATAACATAGAGCTGTTGCTCACTGTTTCAGTTTCATAATTGGTGTAGCTAGGAAAAGTATGTGTGGCCAGATTTATAACT GGATATGTTGTTTGTAAACATTATCTGCCCATGTAATTTTATTAGTGATAGACACTGCAATCCCATTAACAGTAATGAATTGTGTGCTTGAATGAGATGA GATGATACCAATAAATATAAGAAATACTGATGCATTTCTTACTATATAAACTTTGTACTGGATTTTGGATTGCCC
• Tissue: pods
• Gene name: LI_gene_189630;
• Additional information: details;

Expression of Ll_transcript_472558

FPKM

• PAB: 42.1
• PNAB: 14.5
• PS1: 15.6
• PS2: 8.2
• PS3: 14.5
• PW1: 19.6
• PW2: 18
• PW3: 15

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_472558

• Blastp: Probable protein phosphatase 2C 59 from Arabidopsis with 86.27% of identity
• Blastx: Probable protein phosphatase 2C 59 from Arabidopsis with 88.13% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (AT4G31750)
• CantataDB: Link to cantataDB annotations (CNT0001502)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417353.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;