Ll_transcript_473740

• Id Trinity: TRINITY_DN52053_c0_g1_i22
• Name Transcript: Ll_transcript_473740
• Sequence: GGAAAGGTTTTAATAAGATTGATCGAAAGGGTTCCATGGAGTGCGGGAGAAAAAGAGAAAGAGTAAGAGGAAGAGTGAGTGAGAACCACAAACATGGCTA TTTTGAAGGAGCTTGTAAGTTTTACGCTTCCACAACCACAAAACCTCACTCTCCTCCATTCCCGCAATACCAACAATACTCATTTCCCTTCACATTTTTT TTCCAATTCCATGCAAATGCTACCTATTCTGCCAATTTTCATTCAATTTCTCCAAACCATTGGTGCTGTTGTCTTGTGATTTTTATTCAGCTAACTGAAT ATGGGCATTCCGGAAAACATAGTTGTCGGTTCCCATGTTTGGGTTGGAGATCCAGAATTAGTTTGGATTGATGGACAAGTACTGAGTATTAATGGAGATG AAGCTGATATTCAAGCTAGCAATGGGAAGAAGGTTGTTTCCCATTTATCAAAATTACATCCCAAGGACACGGAGGCTCCTACTGATGGAGTTGATGACAT GACCAAGCTTGCATATTTGCATGAGCCAGGGGTGCTGCATAATTTGGAAATTAGATACAAGATGAATGAAATATATACGTACACTGGAAATATTCTTATT GCTATCAATCCATTCCAAAGTCTTCCTGACCTGTATGATGCAAATATGATGAAACACTACAAGGGAGCAACATTGGGAGATTTAAGCCCACATGTTTTTG CTATTGCTGAAGCAGCATATAGGGCAATGATTACCGACGAGAAAAGTAATTCTATTCTGGTCAGTGGTGAGAGTGGTGCTGGTAAGACAGAAACCACTAA AATGCTTATGTGTTATCTAGCATATTTGGGTGGTCGCGTTGCATCTGAAGGAAGGACTGTTGAACAACAAGTTCTTGAATCAAACCCAGTTCTTGAAGCA TTTGGTAATGCAAAAACTGTTAGAAATAACAATTCCAGCCGTTTCGGAAAATTTGTTGAGATTCAATTTGATAAATATGGACGAATATCTGGTGCAGCCA TTAGAACTTATCTGCTAGAGAAATCTCGAGTTTGCCAAATATCAGATCCCGAGCGTAACTATCACTGTTTTTACCTTCTTTGTGCTTCTCCCCCCGAGGA AAAGGAGAAATATAAGTTAGGAGATCCTAGAGCATTTCACTACCTAAATCAATCCAGTTGCTATGAATTAGCTGGTGTTAATGCTGCTCAAGAATATCTT AGCACCAAGAGAGCCATGGATATTGTGGGAATCAGTCAGGAAGAGCAGGATGCAATTTTCAGAGTTGTAGCTGCTATTCTTCATATCGGAAACATTAAGT TTGCAAAATCAGAAGAAACAGATTCATCGGTTCTTGAAGATGAAGAGTCCAAGTTCCATCTCCAAACAACAGCAGAACTTCTAATGTGTGACCCTAATGC TTTGGAAGATGCACTTCGTAAGCGTGTGATGATTACCCCAGAAGAAATTATCATGAGAAGTCTCGATCCTGTTGGTGCTACAGTTAGTAGAGACGGTTTA GCAAAGACACTATATTCTCGTTTATTTGACTGGTTAGTCTATAAAATTAATGTCTCCATTGGGCAGGATCCTAGCTCAAAATTTCTCATTGGCGTTCTTG ACATATACGGTTTTGAAAGTTTTGTTTCTAATAGTTTTGAGCAGTTTTGTATTAATTTCACAAATGAAAAGCTGCAGCAACACTTCAACCAGCATGTGTT TAAGATGGAGCAAGAACAATATACAAAAGAAGGGATTAACTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTACTGGATCTTATTGAAAAGAAACCG GGTGGAATCATTGCTCTGCTTGATGAAGCTTGTATGTTTCCAAAATCAACTCATGAAACATTTTCGCAAAAGCTTTATCAGACGTTCAAAGATCACAAGC GCTTCGTCAAGCCAAAATTGGCACGCTCGGACTTCACAGTTGTTCATTATGCAGGGGAGGTCCAGTATCGGTCTGAGCTGTTTTTAGACAAAAATAAAGA CTATGTTGTTCCTGAACATCAAGACATGCTAAGTGCTTCCAGATGTTCATTTGTATCAGGCCTTTTCCTCCCACTTTCTGAGGAGACAGCCAAATCTGCC AAGTTTTCTTCTATTGGTTCTCGTTTTAAGCTACAATTACAACAATTGATGGAAACTCTCAATCTGACAGAACCCCACTATATTAGGTGTGTGAAGCCAA ATAATCTATTACAACCTGGAATATTTGAGAATGTGAATGTCATCCAACAATTACGTTCTGGTGGTGTTCTTGAAGCAGTACGAATTAAATGTGCTGGATT TCCCACTCATAGGACTTTTCATGATTTTTTAACTCGAGTAGGAATTCTTGCTCCGGAGGTCCTTCTAGGGAACTTCAATGAAAAAGATTCTTGTAAAATG ATTTTGGAGAAGATTGGCCTATCAGGTTATCAGATAGGGGAAACACAAATATTCCTAAGAGCTGGTCAGATGGCTGAGTTGGATGCACAGAGAGCACGCC TGCTTAACAATTCTGCAACAGTTATCCAGAAGCAGATTAAAACTCATTTTAGTAGGAAAACTTATGTTGCATTGCGGAAATCCTCTATTTTTATCACATG AAGTAGCGCATCAATGGTTTGGAAATCTGGTAACTATGGAATGGTGGACTCATTTATGGCTCAATGAAGGTTTTGCAACATGGATAAGTTATATGGCCAC TGATATCTTATTTCCGGAGTGGAATATTTGGACTCAGTTTCTTCAACAAGCTTCCGAAGGTTTACATATGGATGCACTTGAAAAATCACATCCGATCGAG GTAGAAATACATCATGCACGCTCAGTTATTGAAGTCTTCGATGCTATTAGCTATGACAAAGGATGTACTGTAATTAGAATGTTACAGGGCTATCTTGGGG ATGTTGTGTTTCAGAAATCGTTAAGCACGTATATAAAAAGATATGAAGCCCGAAATGCAAGGACAGAAGATCTATGGGATGTTCTTTCGGAGGTATCAAG TCTGCCGATCAACACAATGATGAACAGATGGACAAAACAAACAGGATATCCAGTTATTTATGTTGAGTTAAAAGATCATACTTTGGTAATCAAACAGTCA CAGTTCCTTTTATCCGGTCTGCATGCTGATGGAAAATGGATTGTCCCGATAACCTTGTCTGTCGGTTCGTACGAAAGAAATAGAAAAATTCTTTTGGAGA CCAGTGATTTAAGGGTGGATATATCTGATCTGGTTCAATCTATTAATGTTAATTTAAGCTCAATTAAAACAAAAGATGAGGTGGATGTTCAAGAAAATCT ATGGATCAAAGTCAATGTTGACCAGAGTGGTTTTTATAGGGTGAACTATGAAGACAAACTTGCAGTTCTATTGAGGAAAGCCATACAAAACAATTGCTTG CTGCCCACGGATAAATTCGGCATTTTGGATGATGGAAATGCTCTTTGTCAGGCTTGTGAACAATCACTTGCATCTTTGCTTATGTTGATAGATGTTTACA GAAAAGAGTTTGATTATATTATTGTATCAAAACTGATTGAGGTTTGTAAAAATGTTCTGAATGTCTCCATTGATGCAATACCAGATTCAATAAATGAGTT GAAGCAATATTTTATCAACATTCTCTTGTATTCTGCTGAACAGTTAGGTTGGGACTCTATATCTGGAGAAGACCACACTATTTCACTCTTGAGGGGAGAA ATTTTTCAGGCCTTGGCTATCTTTGATCATGATAAAACTCAGAAAGAAGCGATTCGGCGCTTTCAGATTTCCTTAGATGATAGAAACACTACTCAACTTT CAGCCAATACTAGAAGGGCTGCTTATATATCAGTAATGAGGAATGCAACCACCGAAAGTAGGACTGGATTGGAGTCCCTATTGAGTTTGTATAGGAGTAC TGATATACTGCAAGAAAGGGACAGAATATTGCGT
• Tissue: pods
• Gene name: LI_gene_189670;
• Additional information: details;

Expression of Ll_transcript_473740

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.4
• PS2: 0
• PS3: 0.3
• PW1: 0.2
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_473740

• Blastp: Myosin-9 from Arabidopsis with 77.22% of identity
• Blastx: Myosin-9 from Arabidopsis with 76.43% of identity
• Eggnog: myosin heavy chain(COG5022)
• Kegg: Link to kegg annotations (AT1G08730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453131.1)
• Pfam: Myosin N-terminal SH3-like domain (PF02736.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;