Id Trinity | TRINITY_DN52053_c0_g1_i33 |
---|---|
Name Transcript | Ll_transcript_473756 |
Sequence | GGAAAGGTTTTAATAAGATTGATCGAAAGGGTTCCATGGAGTGCGGGAGAAAAAGAGAAAGAGTAAGAGGAAGAGTGAGTGAGAACCACAAACATGGCTA TTTTGAAGGAGCTTGTAAGTTTTACGCTTCCACAACCACAAAACCTCACTCTCCTCCATTCCCGCAATACCAACAATACTCATTTCCCTTCACATTTTTT TTCCAATTCCATGCAAATGCTACCTATTCTGCCAATTTTCATTCAATTTCTCCAAACCATTGGTGCTGTTGTCTTGTGATTTTTATTCAGCTAACTGAAT ATGGGCATTCCGGAAAACATAGTTGTCGGTTCCCATGTTTGGGTTGGAGATCCAGAATTAGTTTGGATTGATGGACAAGTACTGAGTATTAATGGAGATG AAGCTGATATTCAAGCTAGCAATGGGAAGAAGGTTGTTTCCCATTTATCAAAATTACATCCCAAGGACACGGAGGCTCCTACTGATGGAGTTGATGACAT GACCAAGCTTGCATATTTGCATGAGCCAGGGGTGCTGCATAATTTGGAAATTAGATACAAGATGAATGAAATATATACGTACACTGGAAATATTCTTATT GCTATCAATCCATTCCAAAGTCTTCCTGACCTGTATGATGCAAATATGATGAAACACTACAAGGGAGCAACATTGGGAGATTTAAGCCCACATGTTTTTG CTATTGCTGAAGCAGCATATAGGTGAGGTTTTCACTGTCAATTTGTTTTTCTTAAATGGTATCCAAATTATCCACTGTTTTGTTAAAATAGGGCAATGAT TACCGACGAGAAAAGTAATTCTATTCTGGTCAGTGGTGAGAGTGGTGCTGGTAAGACAGAAACCACTAAAATGCTTATGTGTTATCTAGCATATTTGGGT GGTCGCGTTGCATCTGAAGGAAGGACTGTTGAACAACAAGTTCTTGAATCAAACCCAGTTCTTGAAGCATTTGGTAATGCAAAAACTGTTAGAAATAACA ATTCCAGCCGTTTCGGAAAATTTGTTGAGATTCAATTTGATAAATATGGACGAATATCTGGTGCAGCCATTAGAACTTATCTGCTAGAGAAATCTCGAGT TTGCCAAATATCAGATCCCGAGCGTAACTATCACTGTTTTTACCTTCTTTGTGCTTCTCCCCCCGAGGAAAAGGAGAAATATAAGTTAGGAGATCCTAGA GCATTTCACTACCTAAATCAATCCAGTTGCTATGAATTAGCTGGTGTTAATGCTGCTCAAGAATATCTTAGCACCAAGAGAGCCATGGATATTGTGGGAA TCAGTCAGGAAGAGCAGGATGCAATTTTCAGAGTTGTAGCTGCTATTCTTCATATCGGAAACATTAAGTTTGCAAAATCAGAAGAAACAGATTCATCGGT TCTTGAAGATGAAGAGTCCAAGTTCCATCTCCAAACAACAGCAGAACTTCTAATGTGTGACCCTAATGCTTTGGAAGATGCACTTCGTAAGCGTGTGATG ATTACCCCAGAAGAAATTATCATGAGAAGTCTCGATCCTGTTGGTGCTACAGTTAGTAGAGACGGTTTAGCAAAGACACTATATTCTCGTTTATTTGACT GGTAATATGCTTTTGTCATGTGCAAATATGAAATTAGAAGAAAAAAAAGGATGTGCAGTGTTTGTTAAGGTCTAAATGTTTTCTTATTTCACTAAAATAG AGTAAAGGAATACATCAATTACAGTTATGTATTTTTTGTTATGTCCAGGTTAGTCTATAAAATTAATGTCTCCATTGGGCAGGATCCTAGCTCAAAATTT CTCATTGGCGTTCTTGACATATACGGTTTTGAAAGTTTTGTTTCTAATAGTTTTGAGCAGTTTTGTATTAATTTCACAAATGAAAAGCTGCAGCAACACT TCAACCAGCATGTGTTTAAGATGGAGCAAGAACAATATACAAAAGAAGGGATTAACTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTACTGGATCT TATTGAAAAGAAACCGGGTGGAATCATTGCTCTGCTTGATGAAGCTTGTATGTTTCCAAAATCAACTCATGAAACATTTTCGCAAAAGCTTTATCAGACG TTCAAAGATCACAAGCGCTTCGTCAAGCCAAAATTGGCACGCTCGGACTTCACAGTTGTTCATTATGCAGGGGAGGTCCAGTATCGGTCTGAGCTGTTTT TAGACAAAAATAAAGACTATGTTGTTCCTGAACATCAAGACATGCTAAGTGCTTCCAGATGTTCATTTGTATCAGGCCTTTTCCTCCCACTTTCTGAGGA GACAGCCAAATCTGCCAAGTTTTCTTCTATTGGTTCTCGTTTTAAGCTACAATTACAACAATTGATGGAAACTCTCAATCTGACAGAACCCCACTATATT AGGTGTGTGAAGCCAAATAATCTATTACAACCTGGAATATTTGAGAATGTGAATGTCATCCAACAATTACGTTCTGGTGGTGTTCTTGAAGCAGTACGAA TTAAATGTGCTGGATTTCCCACTCATAGGACTTTTCATGATTTTTTAACTCGAGTAGGAATTCTTGCTCCGGAGGTCCTTCTAGGGAACTTCAATGAAAA AGATTCTTGTAAAATGATTTTGGAGAAGATTGGCCTATCAGGTTATCAGATAGGGGAAACACAAATATTCCTAAGAGCTGGTCAGATGGCTGAGTTGGAT GCACAGAGAGCACGCCTGCTTAACAATTCTGCAACAGTTATCCAGAAGCAGATTAAAACTCATTTTAGTAGGAAAACTTATGTTGCATTGCGGAAATCCT CTATTTTTATCACATGAAGTAGCGCATCAATGGTTTGGAAATCTGGTAACTATGGAATGGTGGACTCATTTATGGCTCAATGAAGGTTTTGCAACATGGA TAAGTTATATGGCCACTGATATCTTATTTCCGGAGTGGAATATTTGGACTCAGTTTCTTCAACAAGCTTCCGAAGGTTTACATATGGATGCACTTGAAAA ATCACATCCGATCGAGGTAGAAATACATCATGCACGCTCAGTTATTGAAGTCTTCGATGCTATTAGCTATGACAAAGGATGTACTGTAATTAGAATGTTA CAGGGCTATCTTGGGGATGTTGTGTTTCAGAAATCGTTAAGCACGTATATAAAAAGATATGAAGCCCGAAATGCAAGGACAGAAGATCTATGGGATGTTC TTTCGGAGGTATCAAGTCTGCCGATCAACACAATGATGAACAGATGGACAAAACAAACAGGATATCCAGTTATTTATGTTGAGTTAAAAGATCATACTTT GGTAATCAAACAGTCACAGTTCCTTTTATCCGGTCTGCATGCTGATGGAAAATGGATTGTCCCGATAACCTTGTCTGTCGGTTCGTACGAAAGAAATAGA AAAATTCTTTTGGAGACCAGTGATTTAAGGGTGGATATATCTGATCTGGTTCAATCTATTAATGTTAATTTAAGCTCAATTAAAACAAAAGATGAGGTGG ATGTTCAAGAAAATCTATGGATCAAAGTCAATGTTGACCAGAGTGGTTTTTATAGGGTGAACTATGAAGACAAACTTGCAGTTCTATTGAGGAAAGCCAT ACAAAACAATTGCTTGCTGCCCACGGATAAATTCGGCATTTTGGATGATGGAAATGCTCTTTGTCAGGCTTGTGAACAATCACTTGCATCTTTGCTTATG TTGATAGATGTTTACAGAAAAGAGTTTGATTATATTATTGTATCAAAACTGATTGAGGTTTGTAAAAATGTTCTGAATGTCTCCATTGATGCAATACCAG ATTCAATAAATGAGTTGAAGCAATATTTTATCAACATTCTCTTGTATTCTGCTGAGTAAGGAATAAACTTTACAATTTTATTATGGCCTTGAACTTCTTC TCTCACAATAATGCACCTGAATGGTTTTTCTTCTCCCTTGATTGAATATTTACATTGGAAATTCTGTAAGGTTTAGTGCATATAGATGCTTTGTGGCAGT AAAGTTTCTGCATTTATTGAATCAATATTAATCTACAAATATGGCAAATATTTGCATGTTGTTTCATAGTAACATTATTATCTCATTTACTCTACGTACC GCATACTGAATTCACGACGCCATGTATCATGTATCATATTCGTGTAGAGAGGTCTCATAAAATTAATATAAAATGTAATGAACTGCGCCCAGGTGAACTA CATGTACCGCGTCTCATGTAACTATGCGATGTGTGTTGTTCTACACCCAACATGATACAAAGTATTCAATCATTTTACAAAATCAATATCTTGTAAGAAC ATTTGTGTGCTCATGCTGGAAAATGACATGCTAGCTTACTGATTGTGTAGACAGTTAGGTTGGGACTCTATATCTGGAGAAGACCACACTATTTCACTCT TGAGGGGAGAAATTTTTCAGGCCTTGGCTATCTTTGATCATGATAAAACTCAGAAAGAAGCGATTCGGCGCTTTCAGATTTCCTTAGATGATAGAAACAC TACTCAACTTTCAGCCAATACTAGAAGGGCTGCTTATATATCAGTAATGAGGAATGCAACCACCGAAAGTAGGACTGGATTGGAGTCCCTATTGAGTTTG TATAGGAGTACTGATATACTGCAAGAAAGGGACAGAATATTGCGTTGTATTGCATCAAGTGCAGACCCAAATATAGTTGTAGATGCACTGAATCTTTTGT TGTCCGGCGAGATTCCAGATCAAGATATTGTTTATGTACTAGGTGGAATAAGCTTGGAATGCAGTGAAGTTGCATGGAGATGGTTGAAGGGTAATTGGGA AGGAATCCTGGCCAAATATGGTGCTGGACTTTTGCTCACTAATTTCATTAACCAAATCGTCCCACTGGTTAACAGCAATGAAAAAGCGGACGAGATCGAA GCATTTTTCGCAAGTAACATGAACCCTTCCATTGTTATGAACTTGAAGTTGAGCGTCGAGCAAATCCGTATCAAAGCAAGGTGGATTCAGAGTGTAAAGC AAGAGCAGTCTCTGCCAGACTTAATCAAACAATTAGCTAAGAGGAATTGATAACTTTGCCATTCCCAGATTGAGTGACAATAATTGGCTAAGACCAAAAA CTCTATCAAGTTATGAG BLAST |
Tissue | pods |
Gene name | LI_gene_189670; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_473756
Blastp | Myosin-9 from Arabidopsis with 75.28% of identity |
---|---|
Blastx | Myosin-9 from Arabidopsis with 69.88% of identity |
Eggnog | myosin heavy chain(COG5022) |
Kegg | Link to kegg annotations (AT1G08730) |
CantataDB | Link to cantataDB annotations (CNT0000134) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453131.1) |
Pfam | Myosin head (motor domain) (PF00063.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |