Ll_transcript_472896

• Id Trinity: TRINITY_DN52054_c0_g1_i1
• Name Transcript: Ll_transcript_472896
• Sequence: ATAAAGAGATCAAATCAGACTCATATCTAATACAAAAGGATAATGTTAATAATATTGCATGAATCATTAAATCGGCCAATGTATTAGTATAAGGAGAGAT TTGGGCCTTTGGCCCCGTCTATAATATTAAGTAAAAGTTGCGTTAAAGTTAAATTAGTTCAAAATCCAGTAATCCTTTGCATCTGCACTCATTCTCTAAA TCTCACTCTTCCTTCGTTATCAGATCTTCGTTTCTCTTCAAAATCACACCGCAATGGCCAATTCCTCCGCCACCGTCCCAGTCAGAAAGCCCATCACTCA CGTCATTTTCGACATGGACGGTCTCTTGCTCGACACGGAGAATTTCTATACACAAGTTCAGGAAATTATACTTGCTAGATACAATAAAACCTTTGATTGG AACCTCAAGGCTAAGATGATGGGAAAGAAAGCAATAGAAGCTGCTAGGGTTTTTGTTGAAGATACTGGAATTAGTGATTCTCTTAGTGCTGAGCAGTTTC TAGTAGAAAGAGAAGAAATGTTGCGGGATTTGTTTCCATCAAGTGATCTCATGCCAGGTGCTAGCCGGTTAATCAGGTATCTACATGCAAAAGGAGTTCC ATTTGGCTTGGCAACTGGTTCTCATAGGCGACATTTTGAATTGAAAACTCAAAAACATGGTGATATCTTTTCTTTAATGCATCATGTTGTTCTTGGTGAT GACCCTGAAGTTAAACAAGGCAAACCATCACCGGACATATTTCTTGCTGCAGCCAAGAGATTTGAGGGTGGACCTGTAGATCCTAGTAACATTCTTGTTT TTGAAGATGCACCCTCGGGAGTTCTTGCTGCTAAAAATGCTGGGATGTCTGTTGTTATGGTTCCTGATCCAAGGTTGGACAAATCTTTTCATGATACAGC GGACCAAGTTTTGAACTCACTGTTGGATTTCAACCCTAGTGAATGGGGTTTGCCTCCGTTTGAAGATAATAGAAGCTGAACTTTGGCCTTCATTACTGTC ATACATTTTTTATTGCAGACAAAGAAGGTTGCATATCTCTTGTACAACTAAATCGATGAGAAATTAATCCATTTCATAGAATGTCAGTTCCATTGTTTGA ACTACATTCTTGTTCCTTGTAATAATATTATTACAGCAATAAGTATCAGGTTGTCACCTTAGCTGATATATTGTTTACATGTTTCTCTAGTGGGTTGAAA CATGATTGGATTTAATTTTTTACCAATATATCAAGTGCTCTTCTTTCAAAAGAAGAGAACAATGGGTCCACATTAAAAATAATATTATAGGTAGGAAAC
• Tissue: pods
• Gene name: LI_gene_189678;
• Additional information: details;

Expression of Ll_transcript_472896

FPKM

• PAB: 4.3
• PNAB: 15.2
• PS1: 11.1
• PS2: 7.3
• PS3: 9.9
• PW1: 9.1
• PW2: 9.1
• PW3: 6.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_472896

• Blastp: (DL)-glycerol-3-phosphatase 2 from Arabidopsis with 74.48% of identity
• Blastx: (DL)-glycerol-3-phosphatase 2 from Arabidopsis with 74.48% of identity
• Eggnog: HAD-superfamily hydrolase subfamily IA variant 3(COG0637)
• Kegg: Link to kegg annotations (AT5G57440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442307.1)
• Pfam: haloacid dehalogenase-like hydrolase (PF00702.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;