| Id Trinity | TRINITY_DN52054_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_472909 |
| Sequence | GTTAATTATAATAATAATTAATAACGTAATATTATATGATATGCTAAATTTTTACTCTGTACATATATATTAATTATTTCAAACATGGTTGCGTGGAAGT TTAATTAGTTCAAAATCTGGAGATGCTTGGCATCTGCACTTATTCTTTGCACACTGCACCATTCATCTCTAGATCTCACTCTTCGTTCCTTATCAAATCT TCATTTCGAAACCACACCGCAATGGCCAATTCCTCCGCCACAGTCACCGTCAGAAAGGCCATCACACACATCATTTTCGACATGGACGGTCTCTTGCTCG ACACGGAGAATTTCTATACACAAGTTCAGGAAATTGTACTTGCTAGATACAATAAAACATTTGATTGGAACCTGAAGGCTAAGATGATGGGAAAGAAAGC AATAGAAGCTGCTAGGGTTTTTGTTGATGAAACTGGAATTAGTGATTCTCTTTCCGCTGAGCAGTTTCTAGTAGAAAGGGAGGATATGCTACGGGATTTG TTTCCAACAAGTGACCTCATGCCAGGTGCTAGCTGGTTAATCAGGCATCTACATGCAAAGGGAGTTCCATTTGGCTTGGCAACTGGTTCACACAGGCGAC ATTTTGAATTGAAAACTCAAAGACATGGTGAAATCTTTTCATTAATGCATCATGTTGTTCTTGGTGATGACCCTGAAGTTAAACAAGGCAAACCATCACC AGACATTTTTCTCGCAGCAGCCAACAGATTTGAGGGTGGACGGGTAGATCCTAGTAACATTCTTGTTTTTGAAGATGCGCCCTCAGGAGTTCTTGCAGCT AAAAATGCTGGGATTGATGGCTAAAGGATTAGAGATTGCCAGACAAGGCACTACCAAGGCTAATTCTTAAGTTGGTAGGGACTGAACTTTGCTAACAATC CATGGAGGGCAATAATTGTTGCTGGGGTGCCCGGAAAGAATATTATTTTGAAAGAGTCTGTTGTTATGGTTCCTGATCCAAGGCTGGACAAATCTTTTCA TGATGCAGCAGACCAAGTTTTGAAGTCACTGTTGGATTTCAACCCTAGTGAGTGGGGTTTACCTCCGTTTGAAGATAATGGAAGCTGAAATTTGGTCTCC ATTACTGCAGTACGATTTTGACTGCAGAGGGAGAAGGCTGCACATCCCTTGCCCTACTAAATCGATGAGTAAAATGAAGTGCTACTGAGATCTTTGAAAA CATGAAGTAAAATATAACTTGGGACATGAAGAAAACTTGATGCTACAACAGATACTATTTTATCTGTCCCACCATACCCATTAAGGAAGAAGAGCCCACT TATAGGTGCAGCATGAAAAAGGAACTATCCAATCAATTAAGTACATTATTACTTGATCGCATAAATTAGTAATTATAGAAAATGGTTATGTGAGTAGGAT AGGTCTGCAAGATTAGTAGATTTACAAACCTACTCCTTTTCTATTTCAATTTAATCTGTCAAAACTGCATTATGTTTGTTTGAGGTGAATGTTAGATTGT ATAAAAGAGCAAATATAGGTAAACTAACATAGTAGAATGTGTACGTATAATTTATACCTGTATTATTTTTGATAGATTATATAACCTTATTGAAGACACC TTTATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_189678; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_472909
| Blastp | (DL)-glycerol-3-phosphatase 1, mitochondrial from Arabidopsis with 75.61% of identity |
|---|---|
| Blastx | (DL)-glycerol-3-phosphatase 1, mitochondrial from Arabidopsis with 62.67% of identity |
| Eggnog | HAD-superfamily hydrolase subfamily IA variant 3(COG0637) |
| Kegg | Link to kegg annotations (AT4G25840) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454369.1) |
| Pfam | haloacid dehalogenase-like hydrolase (PF00702.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |