Ll_transcript_472902

• Id Trinity: TRINITY_DN52054_c0_g1_i5
• Name Transcript: Ll_transcript_472902
• Sequence: GTTAATTATAATAATAATTAATAACGTAATATTATATGATATGCTAAATTTTTACTCTGTACATATATATTAATTATTTCAAACATGGTTGCGTGGAAGT TTAATTAGTTCAAAATCTGGAGATGCTTGGCATCTGCACTTATTCTTTGCACACTGCACCATTCATCTCTAGATCTCACTCTTCGTTCCTTATCAAATCT TCATTTCGAAACCACACCGCAATGGCCAATTCCTCCGCCACAGTCACCGTCAGAAAGGCCATCACACACATCATTTTCGACATGGACGGTCTCTTGCTCG ACACGGAGAATTTCTATACACAAGTTCAGGAAATTGTACTTGCTAGATACAATAAAACATTTGATTGGAACCTGAAGGCTAAGATGATGGGAAAGAAAGC AATAGAAGCTGCTAGGGTTTTTGTTGATGAAACTGGAATTAGTGATTCTCTTTCCGCTGAGCAGTTTCTAGTAGAAAGGGAGGATATGCTACGGGATTTG TTTCCAACAAGTGACCTCATGCCAGGTGCTAGCTGGTTAATCAGGCATCTACATGCAAAGGGAGTTCCATTTGGCTTGGCAACTGGTTCACACAGGCGAC ATTTTGAATTGAAAACTCAAAGACATGGTGAAATCTTTTCATTAATGCATCATGTTGTTCTTGGTGATGACCCTGAAGTTAAACAAGGCAAACCATCACC AGACATTTTTCTCGCAGCAGCCAACAGATTTGAGGGTGGACGGGTAGATCCTAGTAACATTCTTGTTTTTGAAGATGCGCCCTCAGGAGTTCTTGCAGCT AAAAATGCTGGGATTGATGGCTAAAGGATTAGAGATTGCCAGACAAGGCACTACCAAGGCTAATTCTTAAGTTGGTAGGGACTGAACTTTGCTAACAATC CATGGAGGGCAATAATTGTTGCTGGGGTGCCCGGAAAGAATATTATTTTGAAAGAGTCTGTTGTTATGGTTCCTGATCCAAGGCTGGACAAATCTTTTCA TGATGCAGCAGACCAAGTTTTGAAGTCACTGTTGGATTTCAACCCTAGTGAGTGGGGTTTACCTCCGTTTGAAGATAATGGAAGCTGAAATTTGGTCTCC ATTACTGCAGTACGATTTTGACTGCAGAGGGAGAAGGCTGCACATCCCTTGCCCTACTAAATCGATGAGTAATGAGTCCGTTGCATAGAATGCCATTTAC ATTGTTTGGACTTTATATCTTTTTGGTAGTAATAATTTAACAACAATCTCTATTAACTTGGGACCATAGTCACCTAGTATGTGATTATATTTTATACTTA GTATATGGCATGTTACCTTGCCAAATACCTGACGTTAGGACTGCACTTAGTTGATACGTCTAGCATGCTCTATACATAGTACTGTGTTGATAGACACTCT CGTGCTTGTCAACTAGCATTCATATTTTTTTATATTTAGCCTGTGATTTTTACATGTTATAAAGGTTCCACATGATATCTCATTTGAGATAATCATATTA AGAAGAATCATGTTAATATGAAGATGCTTACCTGTGCACCATACTATACTCCAAAACAATTGTAAGCTCAAAATATTACAAAATTCATGGTTTCACTAAA AAATAAGATAAAACTCCCTAAGAATACGTTGTTCCTCAACATTTGGTTATTGTTGCATTAATGATTCTTAATATTTGTTGATAATAACTTGCTCTCAGGT AAAATGAAGTGCTACTGAGATCTTTGAAAACATGAAGTAAAATATAACTTGGGACATGAAGAAAACTTGATGCTACAACAGATACTATTTTATCTGTCCC ACCATACCCATTAAGGAAGAAGAGCCCACTTATAGGTGCAGCATGAAAAAGGAACTATCCAATCAATTAAGTACATTATTACTTGATCGCATAAATTAGT AATTATAGAAAATGGTTATGTGAGTAGGATAGGTCTGCAAGATTAGTAGATTTACAAACCTACTCCTTTTCTATTTCAATTTAATCTGTCAAAACTGCAT TATGTTTGTTTGAGGTGAATGTTAGATTGTATAAAAGAGCAAATATAGGTAAACTAACATAGTAGAATGTGTACGTATAATTTATACCTGTATTATTTTT GATAGATTATATAACCTTATTGAAGACACCTTTATG
• Tissue: pods
• Gene name: LI_gene_189678;
• Additional information: details;

Expression of Ll_transcript_472902

FPKM

• PAB: 1.7
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_472902

• Blastp: (DL)-glycerol-3-phosphatase 1, mitochondrial from Arabidopsis with 75.61% of identity
• Blastx: (DL)-glycerol-3-phosphatase 1, mitochondrial from Arabidopsis with 62.67% of identity
• Eggnog: HAD-superfamily hydrolase subfamily IA variant 3(COG0637)
• Kegg: Link to kegg annotations (AT4G25840)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454369.1)
• Pfam: haloacid dehalogenase-like hydrolase (PF00702.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;