Ll_transcript_473592

• Id Trinity: TRINITY_DN52058_c6_g1_i18
• Name Transcript: Ll_transcript_473592
• Sequence: CCTCATCTCCTTCTCCTGCTAACCCTAATCCCGATCCTAATCTCAATCCCAATCCTAATCCCAATCCTCAACCCGATCCCATTCCTCACTCCTCATCTCC TTCTCCTGCTAACCCTAATCCCGATCCTAATCTCAATCCCAATCCTAATCCCAATCCCAATCAAGTGTTGCTACCGCCGCCTCCGCTGCGCCCTACCCTA TCATTCACGCCTGCGCCACCGCCATCCTTCAGGCCTCTTCATCCGCAGCCTCCTCACTTCTCTCCTTTGCCCAATATCACTTATCACACTCCTCCTGTTC AACCTCCTGGCGTAACTTCTACATCTTCCATGCCAATGCCGATGCAGCCCATCCTCTCCTATCACCTTCCTCCCGGCCAGCCGATGAGACCCTACGCCGT CCCCATGCCGAACGGTTACGCGCCAGCGCCTCCGCAAGGGACCATGCCTCCTGCCGAAGTCGCCCATGTTTGCAACTGAGTGCACGTTGGCCTTGAGTCC TAAGGTATTGCAATCTTTTCAATTCTCATTTTTCTCTACCTCAGTTTTTTTCCCTTTTTAATGCTGCAAAACCGGGCTGCTATTCCTATTTAAAAGAAAC ATAGAAATAACTAGTTTCTTATTAAACCAAGCATGCATGAGATGAAGAAATTCTTGTGTTACGTATTTTCATTTGGTTGATGGGGTAGTTTGAGAAGCCT GCTACTGCTATTTGCAAGTGGTCAAATAAAGGTAAGATTTTTTACATGACCAGAAATTTCAAACTCGGTGGTATTTTTTAATGTTTTCTTCAGGTTGTCA TTTCAGCTGGTGATTGTTGGCTCTGCTGCCATCTCTATTATGCTTTTGATGTGTGGTAACAGCATTCCATTGTTCTTGTTGCATTTTATTTACATGTATC TTCAGTGTTGTATGGATTAGTTTACTATGTATATTCACTTATAACCTGTTCTAATATATTTGCATAGCTATTTTTCTGCATCTTTACAGGAATTCCTCGT TATCCTCCTCCATATGGTATGGTTCGCCCTCTATATCCTCCACGTGCACCTGGATCAGTCAATGTTCTTCCTGTACCACGCCTACCTGTTGCTGGGGTCC CTGCAGTTCGCCCTGTTATTCCTCCTGTCATTAGACCTGTCATTGTTCCTAGTGTCACTCCAGCTGAGAAGCCACAAATCACAGTTTACATTGGCAAGAT TGCACCAACTGTGGAAAATGATTTTATGCTCAATCTCTTTCAGTTATGTGGACCAGTCAAGAGCTGGAAACGCCCTCAGGATTTATCAAATGGAACTCCT AAAGGCTTTGGGTTTTGTGAATTTGAGTCTGATGAAGGGGTTCTTCGTGCCTTGCGTCTGCTCACTAAATTGAGCATTGATGGGCAAGAGTTAACGCTCA ATGTCAATTCAACTATGAAAGAATATCTGAAGCAGTATGTTGAGAAAAAAGCTGAGAACTCAAAGAAAAATGAAACTCAGGCAGTAGGAGCTGAAAACGA TGATGGAAGTGCACAACCTCCTGATGCAAATGGGGATGGGAAACCTGATGCAGAGCACTCAAAGAAAGAGGATAATGATTCAGGTAACAAGGAATCCCAT GATTTGGCAACCTTTGGTATCATCACCGCTGATGATAGGGAAGCTGATAAAGAGGCTATAGAAAAGATTACGAATATGATAGAGGAGAGGTTGAAAACCA GACCTTTGCCTATAGCTCCTGCGCAGGCAGCAGGTGATGGCTCTGCAATAATTTCGGAACAACCAGCTAAAACAAGAGATGGAGACACCGGTGTGGATAT GGGGGGTAAAGAAACAACTGAAGATAAAATTGAGAAAGATACAAACAATGACAGCAAACCAACTAGTGATCATGATAAGGCTGAGAGCCCTGATAGAAGG CATGACAGGAGAAGCAGGGAGAGAGACCGAGATAGAGATCTAAAACGAGAAAAGGAAAGGGAACTCGACAGATATGAAAGAGAGGCAGAGAGGGAGCGTA TTAGAAAAGAGAGGGAACTAAGAAGAAGGATTGATGAGGCTGAGCGGAAGTATGAAGCATGTTTGAAGGAGTGGGAATATAGAGAAAGAGAAAAAGAAAA AGAACGCCAGTATGAAAAGGAGAAAGAGAAAGAAAGGGAACGCAAACGGAGAAAGGATATACTTTATGATGAAGAAGATGAGGATGATGCTTCAAGGAAG AGATGGCGTAGAAGTGCACTAGAGGAAAGGAGAAAGAAGAGGCTGCGGGAAAAGGAAGATGACCTTGTTGACAAACTAAAAGAAGAGCAAGAAATAGCTG AAGCCAAGAAGAGGGCTGAAGACGATCATCAACAGAAACAGCAGAGAGATGCATTGAAGATATTATCTGACCATGTGATAAATGGTGGTGAAAAAGTTAT GGCCTTTGAAGTGATTACTAATGAAGCCAAAATTATTGCTTCTGAACAAGATACTGTAGCTGATTATAGTGGAGAAGGTCATATAGGTGATGTGAATTCT CTTAATGGCATCAATGATGAATCAGCCATGGCACCCGTTTCTGAAACTGATGTGCCATCGGGTGGGAATGCTCCTTCGAAAAAGTTGGGATTTGGTTTAG TTGGGTCTGGAAAAAGAACAAATGTTCCTTCTGTTTTCCATGAGGAAGAGGATGACGATGCACACAAGAACAAAAAATTGAGGCCTTTAGTTCCAATTGA TTACTCAACTGAGGAGCTCCAGGCTGTTCAACCCACTGCTTCTGGGCCGACACCACCAAATTTAGCTGCAGCTGCAGAATTCGCGAAACGTATATCCAGT GCCAGTCTCAAGGAAGAGAAGCTGGATGGAGAACGAGGTAGAAGTAGGCGCTCGAATGAGAGGTCTGCTAAACGAGACAGGGACAAGAGTGATGAAGATG GCACTCACGATAGAGATGAAAGCCGAGAGAAAATTCCTGACCGTGACAGAGATCGAGATCATGGGTCAGATAAACTCAAGACTTCAGGTAACAAGAGGCT CTTGGATGCAAAACAGTTAATTGATATGATACCAAAGACCAAGATGGAGTTGTTCTCGTATGAGATAAACTGGGCCGTGTATGACAAGGTATGTGATTCT TGTCTGTCTGATTTTTACATGTGCAATTATTTGCTCCCGATTCAGAAGAGATTTGCCTATATCTTTTCCATTTGGGTTGAACATAAGGTGCTAGTAAGTT GGATGATGGGCATAGCTTTATCTGTTTCCTGTTATAATATATCTAGAGTATTCTTTTATCTTTCAATCTGGAGTGCACTGTTTTTGTACCCCACAGAATA ACAATGTTGGGAATCTTTTAAATGATGTGGAGAACAACACCATTAAATTCCTTGACAGTTGATTTCTTGTTTGTTTGTTAGGATTGAAAATTTAAAAAAT GGCCTTGTAAGTTGTTTACTGTTTTTTTGGGGGAGAAATTGTTAGTTAGGCATGGTCTGACTCCCCCCTATCATATCCATATGTTAAGCTATCAAATCAT TGTTTAAGAAGAAATTTTTGAAGATAGGTTTATTCCTAACATGGCTTCCACGACCTTAAACATGTCAAGTTATGATTATGGTACTTAGAGTTACTAATTG ATCTTCTGTTTAAATATTGCATGAAAATTTTATGCTTTAAGGCTTTTCTCTCAATTACTGCATCTGTCGTACTTATTTAACTTGGAGGGCTCTTGTATGC CAATTGTTTTGTATTTAAGTAGCTTTTGCTTAAAGGTTCTTGGTGATTTAGATTTGTGTATTTTGGAGTAATTTTTTCTAAATTGTTGGTTTTATATCCC CATTTTGTGTGTTGTTCAGAATCAGCTGCATGAAAGAATGAGACCATGGATTTCGAAGAAAATCCAAGAGTTTTTAGGGGAAGAAGAGAATACATTGATA GATTATATTGTTTCGAGTACACAAGAACATGTGAAAGCATCTCAGATGCTAGAACGCCTTCAGATGATTTTAGATGAAGAAGCTGAGATGTTTGTTCTGA AGATGTGGAGGATGCTTATATTTGAAATAAAGAAGGTAGAAACAGGGCTTGCTTTGAGGTCCAAATAATGGGTTTGTATTTGCAGGATGGAGATTTTTCA TGGTTACTGTCTTCACCTGAAAGTGTAAATTGAGAGCAAAATCATAAAGTCATATCAGTTTGTATTTGCTTTAAGACTCAATTTGGTGTCTCCAAAACCC CTTTTTCCTTTGGCATAAGAATTAGTAGTTGGAGATTTTGTTTGGTGGTTATAGTCTTCATTTACTTTGTTGAGTTATTACAGTTAGAGGCAGACTTGGT CTTCATATTCATGTGGGATTCAGTAATCCATTAACAATTCTGGATTCTCATTTAGGAAATTTCCTTTACAAAATATTTTTGATTTGATTTTAAGTGACTT AAACAGATTGCTCACTCAATCTTAAACATAAGTAATCAGACTTTGTAACATACTCCCTGAATTTGAC
• Tissue: pods
• Gene name: LI_gene_189711;
• Additional information: details;

Expression of Ll_transcript_473592

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0
• PS2: 0.2
• PS3: 0.2
• PW1: 0.1
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_473592

• Blastp: RNA-binding protein 25 from Mus with 33.54% of identity
• Blastx: RNA-binding protein 25 from Mus with 48% of identity
• Eggnog: RNA binding motif protein 25(ENOG410ZRGA)
• Kegg: Link to kegg annotations (67039)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439187.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;