Id Trinity | TRINITY_DN52058_c6_g1_i3 |
---|---|
Name Transcript | Ll_transcript_473574 |
Sequence | TCCCTTCAATGGTTTTATGAATTCCAGAAGTCTCCCATGTTTGCAACTGAGTGCACGTTGGCCTTGAGTCCTAAGGAGTTCCTCGTTATCTTCCTCCATA TGGTATGGTTCGCCCTCTATATCCTATGCGTGCACCTGGACCAGTTAATGTTCTTCCGGTATCACGCCCACCTGTTGCTGGAGTACCTGCAGTTCGCCCT ATTATTCCTCCTGTCATCAGACCTGTCGTTGCTCCTAGTGTCACTCCAGCTCAGAAGCCACAAATCACAGTTTATGTTGGCAAGATTGCACCAACTGTGG AAAATGATTTTATGCTCAATCTCTTTCAGTTATGTGGACCGGTCAAGAGCTGGAAACGCCCTCAGGATTTATCAAGTGGAAATCCTAAAGGCTTTGGGTT TTGTGAATTTGAGTCTGATGAAGGGGTTCT BLAST |
Tissue | pods |
Gene name | LI_gene_189711; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_473574
Blastp | Uncharacterized RNA-binding protein C644.16 from Schizosaccharomyces with 41.51% of identity |
---|---|
Blastx | Uncharacterized RNA-binding protein C644.16 from Schizosaccharomyces with 42.31% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (SPAC644.16) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423639.1) |
Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |