Ll_transcript_473575

• Id Trinity: TRINITY_DN52058_c6_g1_i4
• Name Transcript: Ll_transcript_473575
• Sequence: CCTCATCTCCTTCTCCTGCTAACCCTAATCCCGATCCTAATCTCAATCCCAATCCTAATCCCAATCCTCAACCCGATCCCATTCCTCACTCCTCATCTCC TTCTCCTGCTAACCCTAATCCCGATCCTAATCTCAATCCCAATCCTAATCCCAATCCCAATCAAGTGTTGCTACCGCCGCCTCCGCTGCGCCCTACCCTA TCATTCACGCCTGCGCCACCGCCATCCTTCAGGCCTCTTCATCCGCAGCCTCCTCACTTCTCTCCTTTGCCCAATATCACTTATCACACTCCTCCTGTTC AACCTCCTGGCGTAACTTCTACATCTTCCATGCCAATGCCGATGCAGCCCATCCTCTCCTATCACCTTCCTCCCGGCCAGCCGATGAGACCCTACGCCGT CCCCATGCCGAACGGTTACGCGCCAGCGCCTCCGCAAGGGACCATGCCTCCTGCCGAAGTCGCCCATGTTTGCAACTGAGTGCACGTTGGCCTTGAGTCC TAAGGTATTGCAATCTTTTCAATTCTCATTTTTCTCTACCTCAGTTTTTTTCCCTTTTTAATGCTGCAAAACCGGGCTGCTATTCCTATTTAAAAGAAAC ATAGAAATAACTAGTTTCTTATTAAACCAAGCATGCATGAGATGAAGAAATTCTTGTGTTACGTATTTTCATTTGGTTGATGGGGTAGTTTGAGAAGCCT GCTACTGCTATTTGCAAGTGGTCAAATAAAGGTAAGATTTTTTACATGACCAGAAATTTCAAACTCGGTGGTATTTTTTAATGTTTTCTTCAGGTTGTCA TTTCAGCTGGTGATTGTTGGCTCTGCTGCCATCTCTATTATGCTTTTGATGTGTGGTAACAGCATTCCATTGTTCTTGTTGCATTTTATTTACATGTATC TTCAGTGTTGTATGGATTAGTTTACTATGTATATTCACTTATAACCTGTTCTAATATATTTGCATAGCTATTTTTCTGCATCTTTACAGGAATTCCTCGT TATCCTCCTCCATATGGTATGGTTCGCCCTCTATATCCTCCACGTGCACCTGGATCAGTCAATGTTCTTCCTGTACCACGCCTACCTGTTGCTGGGGTCC CTGCAGTTCGCCCTGTTATTCCTCCTGTCATTAGACCTGTCATTGTTCCTAGTGTCACTCCAGCTGAGAAGCCACAAATCACAGTTTACATTGGCAAGAT TGCACCAACTGTGGAAAATGATTTTATGCTCAATCTCTTTCAGTTATGTGGACCAGTCAAGAGCTGGAAACGCCCTCAGGATTTATCAAATGGAACTCCT AAAGGCTTTGGGTTTTGTGAATTTGAGTCTGATGAAGGGGTTCTTCGTGCCTTGCGTCTGCTCACTAAATTGAGCATTGATGGGCAAGAGTTAACGCTCA ATGTCAATTCAACTATGAAAGAATATCTGAAGCAGTATGTTGAGAAAAAAGCTGAGAACTCAAAGAAAAATGAAACTCAGGCAGTAGGAGCTGAAAACGA TGATGGAAGTGCACAACCTCCTGATGCAAATGGGGATGGGAAACCTGATGCAGAGCACTCAAAGAAAGAGGATAATGATTCAGGTAACAAGGAATCCCAT GATTTGGCAACCTTTGGTATCATCACCGCTGATGATAGGGAAGCTGATAAAGAGGCTATAGAAAAGATTACGAATATGATAGAGGAGAGGTTGAAAACCA GACCTTTGCCTATAGCTCCTGCGCAGGCAGCAGGTGATGGCTCTGCAATAATTTCGGAACAACCAGCTAAAACAAGAGATGGAGACACCGGTGTGGATAT GGGGGGTAAAGAAACAACTGAAGATAAAATTGAGAAAGATACAAACAATGACAGCAAACCAACTAGTGATCATGATAAGGCTGAGAGCCCTGATAGAAGG CATGACAGGAGAAGCAGGGAGAGAGACCGAGATAGAGATCTAAAACGAGAAAAGGAAAGGGAACTCGACAGATATGAAAGAGAGGCAGAGAGGGAGCGTA TTAGAAAAGAGAGGGAACTAAGAAGAAGGATTGATGAGGCTGAGCGGAAGTATGAAGCATGTTTGAAGGAGTGGGAATATAGAGAAAGAGAAAAAGAAAA AGAACGCCAGTATGAAAAGGAGAAAGAGAAAGAAAGGGAACGCAAACGGAGAAAGGATATACTTTATGATGAAGAAGATGAGGATGATGCTTCAAGGAAG AGATGGCGTAGAAGTGCACTAGAGGAAAGGAGAAAGAAGAGGCTGCGGGAAAAGGAAGATGACCTTGTTGACAAACTAAAAGAAGAGCAAGAAATAGCTG AAGCCAAGAAGAGGGCTGAAGACGATCATCAACAGAAACAGCAGAGAGATGCATTGAAGATATTATCTGACCATGTGATAAATGGTGGTGAAAAAGTTAT GGCCTTTGAAGTGATTACTAATGAAGCCAAAATTATTGCTTCTGAACAAGATACTGTAGCTGATTATAGTGGAGAAGGTCATATAGGTGATGTGAATTCT CTTAATGGCATCAATGATGAATCAGCCATGGCACCCGTTTCTGAAACTGATGTGCCATCGGGTGGGAATGCTCCTTCGAAAAAGTTGGGATTTGGTTTAG TTGGGTCTGGAAAAAGAACAAATGTTCCTTCTGTTTTCCATGAGGAAGAGGATGACGATGCACACAAGAACAAAAAATTGAGGCCTTTAGTTCCAATTGA TTACTCAACTGAGGAGCTCCAGGCTGTTCAACCCACTGCTTCTGGGCCGACACCACCAAATTTAGCTGCAGCTGCAGAATTCGCGAAACGTATATCCAGT GCCAGTCTCAAGGAAGAGAAGCTGGATGGAGAACGAGGTAGAAGTAGGCGCTCGAATGAGAGGTCTGCTAAACGAGACAGGGACAAGAGTGATGAAGATG GCACTCACGATAGAGATGAAAGCCGAGAGAAAATTCCTGACCGTGACAGAGATCGAGATCATGGGTCAGATAAACTCAAGACTTCAGGTAACAAGAGGCT CTTGGATGCAAAACAGTTAATTGATATGATACCAAAGACCAAGATGGAGTTGTTCTCGTATGAGATAAACTGGGCCGTGTATGACAAGAATCAGCTGCAT GAAAGAATGAGACCATGGATTTCGAAGAAAATCCAAGAGTTTTTAGGGGAAGAAGAGAATACATTGATAGATTATATTGTTTCGAGTACACAAGAACATG TGAAAGCATCTCAGATGCTAGAACGCCTTCAGATGATTTTAGATGAAGAAGCTGAGATGTTTGTTCTGAAGATGTGGAGGATGCTTATATTTGAAATAAA GAAGGTAGAAACAGGGCTTGCTTTGAGGTCCAAATAATGGGTTTGTATTTGCAGGATGGAGATTTTTCATGGTTACTGTCTTCACCTGAAAGTGTAAATT GAGAGCAAAATCATAAAGTCATATCAGTTTGTATTTGCTTTAAGACTCAATTTGGTGTCTCCAAAACCCCTTTTTCCTTTGGCATAAGAATTAGTAGTTG GAGATTTTGTTTGGTGGTTATAGTCTTCATTTACTTTGTTGAGTTATTACAGTTAGAGGCAGACTTGGTCTTCATATTCATGTGGGATTCAGTAATCCAT TAACAATTCTGGATTCTCATTTAGGAAATTTCCTTTACAAAATATTTTTGATTTGATTTTAAGTGACTTAAACAGATTGCTCACTCAATCTTAAACATAA GTAATCAGACTTTGTAACATACTCCCTGAATTTGAC
• Tissue: pods
• Gene name: LI_gene_189711;
• Additional information: details;

Expression of Ll_transcript_473575

FPKM

• PAB: 2.9
• PNAB: 5.6
• PS1: 8.3
• PS2: 8.5
• PS3: 13.1
• PW1: 9.6
• PW2: 8.3
• PW3: 11.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_473575

• Blastp: RNA-binding protein 25 from Homo with 46.15% of identity
• Blastx: RNA-binding protein 25 from Homo with 46.15% of identity
• Eggnog: RNA binding motif protein 25(ENOG410ZRGA)
• Kegg: Link to kegg annotations (58517)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439187.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;