Ll_transcript_472115

• Id Trinity: TRINITY_DN52061_c0_g1_i13
• Name Transcript: Ll_transcript_472115
• Sequence: CACAATTTCGTTCTTTATTCTCAATTCTCAAAACCCTAACCAATTACCTTCTCAACCCCTTCCTCTCTCTATCTCATTACATAGGTTTTAGTCAATGACC ATTTGATGAATGATGATAGTAGAAAAGGATAAAATGTCTGCTCCTTCGTCACGAGAGCGTGCACAACGCCTTTATGAGAAGAACCTCGAATTGGAGAATA AGCGTCGGAGATCTGCTCAGGCACAGGTCCCATCAGATCCAAATGCTTGGTCGCAAGTGCGTGAGAACTATGAAGCAATAATTCTTGAGGATCTTGCTTT TTCCGAGCAGCACAGTATTGAGTATGCTCTTTGGCAGTTACATTATAAGAGGATCGAGGAATTGAGGGCATACTTACATGCTGCTCTCACTTCTGCAAGC TCCAAATCATCTCAGGGAGGGAAAGTTCCTGTGAGACCTGATCGGATAACTAAAATAAAGCTGCAATTTAAGACATTCCTCTCAGAAGCAACTGGATTCT ACCATGGTCTTATTATGAAAATCAGAGCTAAGTATGGGCTTCCTATTGGTTACTTTGAGGATTCGGAGAATCGGATTGTGACGGAGAAAGATGGAAAGAA ATCTGCTGAAATGAAGAAAGGTTTGATATCTTGTCATCGTTGTCTGATATACTTGGGTGATCTCGCTCGCTACAAAGGATTGTATGGGAAAGGCGATTCG ATAAAACGTGAGTTTGCAGCAGCTTCTAGCTACTATTTACAAGCTGCATCTCTTTGGCCTTCAAATGGAAATCCCCATCACCAGCTTGCCTTATTGGCTT CTTATTCTGGGGACGAATTGGGAACAATCTATCGTTACTTTCGAAGTCTGGCTGTGGATAATCCATTTACAACTGCCAGAGATAATTTAATAGTTGCATT TGAGAAGAATCGTCAAAGTTACTCCCAGCTCTGTGGTGATGTTAAAGCTCTTGCTGCCAGGGAATCTTCTGGTCAATTAACCAGCAAAGAAAGGGGAAAA GTGGAAGCAAAATTTGCAACAGGGGGTACTGGTGTGGAAGCCTGTCCTGGAAAGGAAGGAGCATCCGACATACAAGAGACTTTCAAATCCTTCTGTACCC GTTTTGTCCGTTTAAATGGAATCTTATTCACTCGTACAAGCCTTGAGACCTTCAGCGAAGTTCTGTCTGTTGTTAGCAATGGCATCCGTAAGCTTCTGTC TTCAGGGCATGATGAAGAGCTGAATTTTGGAACGGATACTCTTGAGAATGAACTTGCCATTGTTAAACTGGTTTCCATTACCATATTTACAGTTCATAGT GTGAATAAGGAATCTGAAAGTCAAACTTATGCAGAAATTGTGCAGCGTGCCGTTCTACTTCAGAATGCATTCACTGCAGCTTTTGAATTGATGAGTTTCA TAGTCGAGAGGTGTATTCAGCTGCAGGATCCTTCTTCTAGTTATCTATTACCTGGTATTTTGGTTTTCGTAGAGTGGTTGGCATGTTATCCAGATTTTGC TGCTGGCAACAATGTAGATGAAAAGCAGGCAATTGTTAGATCAAAATTTTGGGTTCATTGTATATCCTTCTTGAATAAGCTACTTTCAGTTGGGCCTATG TCTATTGAAGACGATGAAGATGAGGCCTGCTTTAATAATATGAGCAGGTATGAAGAAGGGGAAACTGAAAATCGGGTTGCTTTATGGGAGGACATTGAGT TACGTGGATTTGTTCCCCTTCTTCCTGCACAAACCATCTTGGATTTTTCAAGGAACCATTCCCTTGGAAGTGGTGGTGAAAAGGAAAGAAAAGCTCGTGT CAAAAGGATTTTAGCTGCAGGGAAGGTTCTAGCAAACGTAGTTAGAATTGATCAGAAAATGATATATTTTAACTCGAAAGGAAAGAATTTTACAATTGGT GTTGAGCCTCAAGTCTCGGATGATTTTGTTCTTGCTCCCTATTCAGCCATACCTGATGCAGAAGAGTTGTTGAAAGAAAATACAGCAGACAAAACCAAGG TGGGAATTGCTCAGCCAGACCAACAGGATGATGATGAGGTTATTGTTTTTAAACCTATTGTAGCTGAGAAACGAGCTGACGCGATGGTTGTCTCATCACG GGTACCCTATGAAGGCTTCGAGTCAGTATCAACAGCCTTTGGTGGTGATATGAAATTTCATATTAATTCGGCTTCTAACTCTCTCAACAATGTGAACCAT CAAACTTCTTTGCCTCCTTCTGTTAGTAGTATGTTACCTCAACACCTGCCTTCAGTTCAGCCACATTCTTTGAGGTGGTTAGAGGAGGAAATAACCCTTC CTAATAGTTTGAAGAGTCTCAGATTCTCGGAGAATGGGCATGCAGTGCAATCTGACTTGCCACTACAAGCTGTATCAATCTCCAATCATACTGCACTTCC AGTTCCTACCCATCAACCTGTAAGTGCTGGTACTAATATGCTTCGTGGTCTCTCAAAAGCTGAAGACTTTGTGATATCATCCAAAGTTGATGCTATCATA CCATCTGGATTTTTTACTGATAATTCTGTTATAAAGACATCATCAGCGTTGCAAGCTAGTTTGAAAAAATCTCCAGTAAGCCGACCTTCCAGGCACCTTG GACCTCCTCCTGGTTTCAGCCTTGTTCCTCCTAGACAAGATATTGAACCAACTGTTTCAGATTTGATTAGCAGGAATCCAATTATGGATGATTACAGTTG GTTGGATGGATATCAGCTTCCTCCACCAACAAAAGGTCTGGGACCC
• Tissue: pods
• Gene name: LI_gene_189726;
• Additional information: details;

Expression of Ll_transcript_472115

FPKM

• PAB: 1
• PNAB: 2.5
• PS1: 0.5
• PS2: 2.3
• PS3: 2.2
• PW1: 2.7
• PW2: 2.5
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_472115

• Blastp: Protein SMG7 from Arabidopsis with 53.04% of identity
• Blastx: Protein SMG7 from Arabidopsis with 53.04% of identity
• Eggnog: homolog, nonsense mediated mRNA decay factor (C. elegans)(ENOG410XR9Z)
• Kegg: Link to kegg annotations (AT5G19400)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455933.1)
• Pfam: Telomerase activating protein Est1 (PF10374.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;