Ll_transcript_474213

• Id Trinity: TRINITY_DN52064_c0_g2_i2
• Name Transcript: Ll_transcript_474213
• Sequence: TAACAACAATCACGCACGCGAGGGTTTAATTAGGGTTTGGATGAGACGACAGCGTTTTATAATGGGCCTGTTTAGAATTGGGCTTAAACATATTGGGCCT GTAATCCAGCCCATATAAAAACCTAACGTAACTCGAAAAAGGTTTCGGATTCGGATCATTTTTCTCTTCTCTTCGACGAAGCAGAAGGTAGTAGCAACTT CACTCACACCATGCCTACCGTAAGCGTGGGTCGGGATCGTCTATATGCGGCTCTAGGAAAATCTTACTCGCAAGAGGAATTCGAAGACTTGTGCTTCAGT TTTGGGATCGAACTCGATGACGTGACTACTGAAAAAGCAATTGTGAGAAAAGAGAAGCATTTGGAAGAAGAAGTCGGTGACGAAGATGAAGAAGTCATTT ACAAAATCGAAGTTCCGGCGAACCGATATGATTTGCTCTGTCTCGAGGGTCTTGCTCAAGCCCTTCGAGTTTTCTGTGGGTTCCAGGAGATCCCGACATA TACATTGGCTGATGTTACTAAAGATGCAATAATCAAAATGCATGTGAAGAAGGAGACATCCCAAATTCGACCATTTGTTGTCTGTGCTGTATTGAGAGGT ATTACTTTTGATAAGGCAAGATACAACAGCTTTATTGACCTCCAAGACAAGCTTCACCAAAACATTTGCCGGCGAAGAACTCTTGTTGCCATTGGCACTC ATGATCTGGATACACTGGAAGGCCCTTTCACATATGAGGCACTGCCACCTTCAAGTATAAATTTCGTTCCACTAAAACAGGAAAAATGCTTCAGAGCTGA TGAGCTGATGGAATTCTACAAATCAGATTTGAAACTGAAGAAATTCTTGCATATCATTGAGGGCTCCCCTGTTTTTCCTGTTCTATATGACCATAAGAGA ACTGTTTTATCTCTTCCGCCTATTATCAATGGTGCACACTCAGCTATCACTCTGGAGACAAAAAATGTATTTATTGAATGTACTGCAACTGATCTGACAA AGGCAAAGATTGTTTTGAATACAATGGTAACAACCTTCTCAGAATATTGTGAAAATAAATTTGTTGTAGAACCAGTTGAAGTGATTTATTCTGATGGAGA GTCACACATATATCCTGATTTGTCTGTCTACAATATGGAAGTTTCACTGCCCTACCTTTCCGGATTGATTGGTGTATCGTTGGAGGCAGAAGAGGTCACT AAGCTCTTAAATAAGATGCAATTGCATGCCAAACAGTCTGCTTCTGACAGTAAGCAGTCTACCTTTGTTGTATCTGTACCTCCAAGTAGAAGTGATATTC TTCACCCGTGTGATGTTATGGAGGATGTTGCAATTGCTTATGGATTCAATGCTATTAAGGATAAAGCGGTAATAGATAATAAGGGCTCAAAGAGATTGGC CTCTTCCTTGACACTTCTTCCACTGAATGAGTTCAGCGATCTTATCAGAAAAGAGGTTGCATTGGTTGGGTTCACCGAGGTCTTGACATTTATACTTTGC TCCAAAAAGGAAAACTTTGCCTTGCTAAACCGCAAAGATGATAAATCAAAAGCAATCATCATTGGAAACCCTAGGTCTTCAGACTTTGAGGCTGTTCGAA CTAGTCTTATACCTGGCATTTTGAAAACCGTGGCTCACAACAAGGATCATCCAAAGCCTATAAAGATTTTTGAAGTGGGTGATATTGCAATTTTGGATGA CAAAAAAGATGTTGGTGCAAAAAATTGTCGCCATCTAGCTGCACTGTACTGTGGCGCTAATGCAGGATTTGAGATAATTCATGGCTTGGTGGACAGAGTA ATGGAAAAGAATGGGGTTCCCTTTGTTTCACCTGGTGATATATCAGGTTATTATATTGAGCAGTCAAATGAGCCTGAGTTTCTTGCTGGTAGACAAGCTA GAATCATTTACAAGGGAAACCAAATTGGCACTTTTGGCATTGTTCACCCAGAGGTATTGAACAACTTTGATATTCCTGATCCGTGCTCTCTTGTTGAACT TAACATTGAAAGTTTCTTGTAGAGATTATTTGTAGAAAATGTAATTTGCAACTTGCCCATCATTTTCTGGATACATTGTTCCTTAGAAGCTCAGCTGCTT CACTATCTTTTCCAACTGCTTTGCCGGCCATTTTTGGAATACCCTCGGAGTTTAGAACTACAGTATCGATGGAAAAGAATGTTAACTTATATGCCCTAGA TTAGGGTGTTTGTTGATTACAGATTTGTTTCATAAGTTTCCCAGTGTCTTATGTTTAGAAGGTAAGATCTGATAAACTATTCATTTTCTCATTTTATTTT TTGGCCACTATACCGAAACAGGATATTTATACTTTTGAAGTTTCTCATTTTCTCATCTTATGTAGTAACATAGATCTTCATTAATAATTGCTACTTATTT TCTTAAAAA
• Tissue: pods
• Gene name: LI_gene_189755;
• Additional information: details;

Expression of Ll_transcript_474213

FPKM

• PAB: 5.2
• PNAB: 31.8
• PS1: 26.8
• PS2: 20.7
• PS3: 23.7
• PW1: 23.4
• PW2: 17.2
• PW3: 13.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_474213

• Blastp: Phenylalanine--tRNA ligase beta subunit, cytoplasmic from Arabidopsis with 71.48% of identity
• Blastx: Phenylalanine--tRNA ligase beta subunit, cytoplasmic from Arabidopsis with 71.15% of identity
• Eggnog: phenylalanyl-tRNA synthetase (beta subunit)(COG0072)
• Kegg: Link to kegg annotations (AT1G72550)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451929.1)
• Pfam: B3/4 domain (PF03483.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;