Ll_transcript_474405

• Id Trinity: TRINITY_DN52067_c0_g2_i11
• Name Transcript: Ll_transcript_474405
• Sequence: CCAAACTTCTGCACGGAAATATAAAGCTCCGTACATTGACCGATGAGTAAGTTAGCCTAGATGTTTCCAGCTCGGATATGATTGCCGCATCCGGCGAGCC CGTACATTTATAACATGACTTAACAGAATCTCTCTTAAAATCAACATTACTTCCAATTTCACTTTCTCTCTATATATCTTCCTTCAATTTGATTCTGCAA CTTACCAAAACCCTAGATCGCTATTCCCCCATCATATACCCGCAATCGACTCTCTTATCCGGTACAATTCATCGGGGAGGAGATAGGTTGTTGAGACCAT TCTGCTTCTTATTCCGAATTCGAAATCGAAATCTGACAGCTGGACGAAGCAAGAAATGGATCCTGCTGGTCGCTATGGTCCGCGTCAAGGCTGGGATAAT AACAACAGCGCTCTTGAGGGTTACGCTGAGGTCCGTGAGCCAAATTTTCGGGTTGGAGGATCTTATGATGAACGTCGCTTTATAGATGAAAAATATCCAA GGGATGGCACATACCAGAGAAATAATTTCCATCGCGACATTTTGGACGGGGAATCCTATCTGCCACCAGGATCTGTTGCTGGACACTGGAGCCAGTCCAA ACGGAGAGGTTATGATGAAGATTATCCACTCAACAAGGAATCCAGACGTTTTCAGAGGCCGTATCATGAATCATATAATCATGTTAATGCTTTAAGGGAC CGTGAAATTGAGACATACCCACCATATGATAAGTTTCGTGATGGCTATGGTAGCATTGATAACTACGGTGATCGAGGATATGATAAACCTGACAGGTTTG CAGGATCTGACCATAATGATTATGAGTATGATGATTATGGCTACAAGTCTCGTCTTACTCATCATCGTAGGGAGGATAGCCATGAGAGGGATTATGATCA TGGTCGTCATAGTTATGATTCTGAATATGAAGGAGGTAGTAGAAGAGATAATAATCGGAGGCGGCGGGAATCCCGTGATCGGGAACGTGAGAGTAGAGAT ATTAGCCGGGAAAGGGATTTGAGTCCACGTAGGAGGCATGAGCGTTCCCGTTCTCGATCACGGTCTGAATCCAATTCCCGTTCCCGTTCCCTTTCTCGTT CCCATTCCCAATCTGGTGGATATGATTATGATGATCATCCAAGATCAAAGTCCCCTCGAGGTCGAAGCCATAGCCGAAGTTATCGAGAAGACAGCTATGT TGACAGTCAATATGATAGAAGTGAAAGACGTAGGGATCGTGAGGACAAGCATCAGCATGAACATTATTCCGTGGCTCCAACTCCAGCTATTGTTGTGAAG GGTCTTTCACAGAAGACGACTGAAGAAGATCTATACCAAATCCTTGCGGAATGGGGTCCCCTTCGTCATGTTCGCATTATAAAGGAGAGAAATTCTGGCA TCTCTAGAGGATTTGCATTTATTGATTTTCCTTCTGTGGGAGCTGCACAAGCAATGATGGAAAAACTAGGAGACGATGGTCTTGTCGTGGATGGGAGAAA GCTTTTCTTTGAATATAGCAGTAAGCCAACTGGAGGTCCAGGTCCTGATGTAGCTATTAAATCTGGTCATAATCATAAGATGATTACAGTACCATCTGAT TGGATATGCACTATATGTGGCTACATCAATTTTGCACGCCGGAGTTCATGCTATCAGTGTAACGAGCCACGGACTGAGGATGCTCCTGCAGCAGCTATTT CATCATCAAATTCAACATTCTTCGGAAGGAAAGGTTTGGAGGCAGGTCCAACTCATGTTTTGGTTGTCCGCGGATTGGATGAAAATGCTGATGAGGAGAT GCTTCGCTATGAGTTTTCCAAACATGCTCCAATTAAGGATCTGCGTCTTGTGAGGGACAAGTTCACTCATGTGTCAAGGGGATTTGCATTTGTACACTTT CATTCGGTGGATGATGCTACGAAAGCTCTTGAGGCAACAAATGGAACAACTCTTGAGAAGAATGGGCAAATTCTAAGAGTAGCATATGCAAAAAGTATCC TGGGCCCTGGATCAGGAACTTCCCAATCGAGCAGTCTTGCAGCTGCTGCGATCGAGGCTGCAACATTTGCTCAACAGTATGATACCGTGGGATGGGCTCC AAAAGAATATAATCCAGATGACAAACAATTTGCTGGTCCAGAGCAAACTGGCACAGAAGTTGGTGCTCCACAATCAGG
• Tissue: pods
• Gene name: LI_gene_189796;
• Additional information: details;

Expression of Ll_transcript_474405

FPKM

• PAB: 0.2
• PNAB: 1.5
• PS1: 2
• PS2: 1.7
• PS3: 1.6
• PW1: 1.6
• PW2: 1.4
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_474405

• Blastp: SUPPRESSOR OF ABI3-5 from Arabidopsis with 54.84% of identity
• Blastx: SUPPRESSOR OF ABI3-5 from Arabidopsis with 66.47% of identity
• Eggnog: RNA binding motif protein(ENOG410YNFQ)
• Kegg: Link to kegg annotations (AT3G54230)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446984.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;