Ll_transcript_474427

• Id Trinity: TRINITY_DN52067_c0_g2_i28
• Name Transcript: Ll_transcript_474427
• Sequence: CTAAATTCTAATCTAAACTTACTTCCAATTTCACTTTCTCTCTTTCAATCTTCCACTCACCAAAAACCCTACATCTTCAATCGTTGCTTCCAATTCCACA CAATCCCAATTTCATTGGTAAAAACCCTAACTGTTACATCTTCATATTCTACGTGTTTAATTATGTTTTCATCATTTGAATAAATTGTTTCATGTTCATA ATTGTTAAATTTTTATCCTTTTCTCTCTCTAGAAACTAGTTATAGATAAAGCTGATGGATTTTGTTGTGTATAGAGGGATTGATATTTGAAGACCCTGTT TATGTTTTTGAGGATTCCACTTATGAAAAGGAGAGGCCATGCAACAAGGGGAGGAGAAAGTTTTTCGGACCCATTTTGCTTCTTCGAATTCGAAATCACT GCCTGGCTTGCCGAGAAAATGGATCCTGGTCGCTACGGAATGCATCAAGGCTGGGATGATAACAACAGCGTAATTGTGGTTTCCTCCTTAAATAAATTCA AACCTATAATGGGGATGAATGAATCATTATTCAAAGAAACTTTTAGGGGTGGGGAATGGATGAATGTCATCCGTAGAAAGAAAGCTAGCTAGCTGTGGGG AAGTCAGGATATGATATGGACTGAGATTTCCCTAACCTCCTCTCATCATTGATTATTTGTTCCTGACATACCTTATTCTCTTGAATGCACAGGCTCTTGA GGGTTACGCTGAGGTCCGTGAGCCAAATTTTCGGGTTGGAGGATCTTATGATGAACGTCGCTTTATAGATGAAAAATATCCAAGGGATGGCACATACCAG AGAAATAATTTCCATCGCGACATTTTGGACGGGGAATCCTATCTGCCACCAGGATCTGTTGCTGGACACTGGAGCCAGTCCAAACGGAGAGGTTATGATG AAGATTATCCACTCAACAAGGAATCCAGACGTTTTCAGAGGCCGTATCATGAATCATATAATCATGTTAATGCTTTAAGGGACCGTGAAATTGAGACATA CCCACCATATGATAAGTTTCGTGATGGCTATGGTAGCATTGATAACTACGGTGATCGAGGATATGATAAACCTGACAGGTTTGCAGGATCTGACCATAAT GATTATGAGTATGATGATTATGGCTACAAGTCTCGTCTTACTCATCATCGTAGGGAGGATAGCCATGAGAGGGATTATGATCATGGTCGTCATAGTTATG ATTCTGAATATGAAGGAGGTAGTAGAAGAGATAATAATCGGAGGCGGCGGGAATCCCGTGATCGGGAACGTGAGAGTAGAGATATTAGCCGGGAAAGGGA TTTGAGTCCACGTAGGAGGCATGAGCGTTCCCGTTCTCGATCACGGTCTGAATCCAATTCCCGTTCCCGTTCCCTTTCTCGTTCCCATTCCCAATCTGGT GGATATGATTATGATGATCATCCAAGATCAAAGTCCCCTCGAGGTCGAAGCCATAGCCGAAGTTATCGAGAAGACAGCTATGTTGACAGTCAATATGATA GAAGTGAAAGACGTAGGGATCGTGAGGACAAGCATCAGCATGAACATTATTCCGTGGCTCCAACTCCAGCTATTGTTGTGAAGGGTCTTTCACAGAAGAC GACTGAAGAAGATCTATACCAAATCCTTGCGGAATGGGGTCCCCTTCGTCATGTTCGCATTATAAAGGAGAGAAATTCTGGCATCTCTAGAGGATTTGCA TTTATTGATTTTCCTTCTGTGGGAGCTGCACAAGCAATGATGGAAAAACTAGGAGACGATGGTCTTGTCGTGGATGGGAGAAAGCTTTTCTTTGAATATA GCAGTAAGCCAACTGGAGGTCCAGGTCCTGATGTAGCTATTAAATCTGGTCATAATCATAAGATGATTACAGTACCATCTGATTGGATATGCACTATATG TGGCTACATCAATTTTGCACGCCGGAGTTCATGCTATCAGTGTAACGAGCCACGGACTGAGGATGCTCCTGCAGCAGCTATTTCATCATCAAATTCAACA TTCTTCGGAAGGAAAGGTTTGGAGGCAGGTCCAACTCATGTTTTGGTTGTCCGCGGATTGGATGAAAATGCTGATGAGGAGATGCTTCGCTATGAGTTTT CCAAACATGCTCCAATTAAGGATCTGCGTCTTGTGAGGGACAAGTTCACTCATGTGTCAAGGGGATTTGCATTTGTACACTTTCATTCGGTGGATGATGC TACGAAAGCTCTTGAGGCAACAAATGGAACAACTCTTGAGAAGAATGGGCAAATTCTAAGAGTAGCATATGCAAAAAGTATCCTGGGCCCTGGATCAGGA ACTTCCCAATCGAGCAGTCTTGCAGCTGCTGCGATCGAGGCTGCAACATTTGCTCAACAGTATGATACCGTGGGATGGGCTCCAAAAGAATATAATCCAG ATGACAAACAATTTGCTGGTCCAGAGCAAACTGGCACAGAAGTTGGTGCTCCACAATCAGGCTTTGTTTGGGATGAAGCATCAGGTTATTACTACGATGC TGCTTCTGGGTTTTACTATGATGGGAATACTGGTCTGTACTATGATGGTAATAATGGGATTTGGTATTCATATGACAACCAAACTCAGCAGTATATCCCT TGCACTGACCAAAATCAGAATAAAACAGATAATAACCCGTCTGAACCTTCCAAAGCATCTGATGGTTCCAGCAGTAAAAAAGTGGTGATTTCGGCACCAG CAATTACCGTCGCATCAGTTGAGAAGCCAGCTTCGTTGGCAGATGCTGTCCAGGCTGCTGCAGCAGCTGCTTTAGCTGCAGAGAAGAAAGAAAAAGAAAA ATCAAAGGAGATAAAGCTTTCCTCAAAAAGCAGTATTCTGGCGAACAAGAAAAAAATAAACAATGTGTTGACAATGTGGAAGCAGAGGAGCCATGAGGGG CGGACTACTCGAGTGGCTCTGGAAGATAATCAGCTCTCTATTTCAGCTGATGATAGACATTCTTCAGGACATTCTGTAAAGAACAAATTAAAAAGTGAGA CTGCGGCAAGGGAAAGTAATGCATCTACTATGGGAGTTCACACAAGTGTTAACCAGGCCATTGCTTTGGATCCTCAGTCACAGCCCCGACCAGTTAGTAA TAGCCTTGGGGGCACTCTGATGGGGGTTATAAGGGGCTCGGGAAGAGGGGTTGTTAAATCAGATACTTCTTATTCCGGTTCTGCAGCTGCCACATCATCT ATGTCAAGTTCATTTTCAGCAAATTTTGATGCACAGACAATTTCTACTCCCTTTAAGACAGATGTCTCTGCCTTGAGTTCACATTCACCATCTGTGGCTT CTGTAAGTGGCAGGCGAAGGTTTTCAGAAATGCCCCATTCTGCTTCAAATAACAAGGAACAATCTCAAACAACCTACAGGGATCGCGCAGCTGAGAGGAG AAATTTGTATGGCTCGTCATCTTCAGTTGGGAATGATTTGGCTGACCTTGAAATTGGGGATTCAAGTAAGTCTGCTTACTTTTTTAATGGGTATCTTTCC TTGAGTTCAACCTATTGTACAATTGTTGAGGTAATAATATTTGCTTGACAGTTATTAAATTATTTCGAAACACTGTCCCGTGCCCACCGAAAAGCTCTGG GAGTAGAGGAAGCCGTAGTTTTACATTAGGGGTTAAGTAAGACCTTGGCATCTGAGTGTAGAATTGGTATTTTTTTTATTTCTTTTGTTCTTCTGATGGA AAGTAAGTAAATCTCTGGGGTAAGGAAATGAAACTTAATTAGATGTGTTTTTTTTCGGTAAAATATAAATAGAACTATCATTTCTTCCAACTCTGTAAAT GATTTCTGGTTTGTTCCAGCTAGGAGAAAGGGATTTGAGTCTAGTATTTGCCCCGCTTCTCCTAAAGACAATTTACTTTTTGAAAATTCAAATAGCCGAA TAGTAAGTGTTCACCTTTCTACGTCGCTGGTAAATTTCTATCTCTGACAATGTGGATTGATTTTTGAAAAAAACAAATCTGCGATCTTAAAGATCGAGAA TTTGCATCAAGGAAGGGTGATCCGATGCCTTTCCCTCCTGGAGTTGGTGGAGGACGAGTGGTTGGAGATGTCAACCTTGATACTTATGAGGTGATTACGG CAGACAAAGCGATTGATGAAAGCAATGTTGGCAATCGGATGCTTCGCAACATGGGATGGCAAGAAGGCTTGGGACTTGGAAAGGATGGAAGTGGAATGGT AGAGCCAGTGAAGGCAGAAGGAATGGAGAAAAGAGCAGGACTTGGGAGTCAGCA
• Tissue: pods
• Gene name: LI_gene_189796;
• Additional information: details;

Expression of Ll_transcript_474427

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.5
• PS3: 0.3
• PW1: 0.3
• PW2: 0.6
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_474427

• Blastp: SUPPRESSOR OF ABI3-5 from Arabidopsis with 56.73% of identity
• Blastx: SUPPRESSOR OF ABI3-5 from Arabidopsis with 57.76% of identity
• Eggnog: RNA binding motif protein(ENOG410YNFQ)
• Kegg: Link to kegg annotations (AT3G54230)
• CantataDB: Link to cantataDB annotations (CNT0001316)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446983.1)
• Pfam: Zn-finger in Ran binding protein and others (PF00641.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;