Ll_transcript_472977

• Id Trinity: TRINITY_DN52071_c1_g1_i13
• Name Transcript: Ll_transcript_472977
• Sequence: GGCTACAAAAATGGAACTTGCTAGTGCTTAGTTATGTGTATGCCTCACATTGGTATGCATATTTTCTTCTTAGAGGTTTCACACTTTCACTCTTCATTAT TGTCAACTTTGCTGGGTAAAAATTGATACTGAACTTTCAATGGTGAAGACATTTCACTATTTTGGTAGTGAAATCTTTGGTAGAGGTTCCTCTTATGTCT GTATCAAAAGTGAAGACAATTACATGGATCCAAATGTTTTGAATTGGAGAGTGATTTGAAGGCTAAAAATGAATCATAGCTAGTGTCAGAGAGTGGAAGG AACATAGTGAGTGAAATCTTTTAAAGCAAGGCATTTCGTGTGTGATTATTGGTTGCGATGAGTCGAGAACAACAGAAACGGGGGAAGCAAGAAAAAGGCT CCAATGGTGCTGAGAAGGTCATTGTTGCAGTCAAAGCATCAAAGGAAGTTCCAAAGACTGCTCTTGTTTGGTCTTTGACTCATGTTGTTCAACCTGGTGA TTGCATTACACTGCTAGTGGTTGTGCCTTCACAGAGTTCGGGCCGAAGATTATGGGGTTTTCCGAGGTTTGCTGGTGACTGTGCCAGTGGCCACAAGAAA TCATATACTACAGGAACAAGTTCAGAACAAAAGACAGATATCACTGATTCTTTCTCTCAGATGATCCTTCAGCTCCACGATGTCTATGATCCTAATAAGA TAAATGTCAAGATTAAAATTGTTTCCGGGTCTCCCTGTGGAGCAGTCGCTGCAGAAGCCAAGAAAATCCAAGCCAATTGGGTTGTTTTAGACAAACATCT CAAACACGAGGAAAAGTGGTGCATGGAAGAGCTGCAGTGCAACATCGTTGTTATGAAGCGTTCCCAACCAATAGTGCTCCGCTTGAATTTGGTTGGATCC CTAAAGAAGGATATTGAAGAAGCAGGTCCATCTCCTTCTGAGCAAGATGAGATGCCTGCAAAACAAACCAAGAAGAAGAACAATTCTTCAAATTCGATAA AAGGACTGGTTGTCACTCCAACTAGCAGCCCTGAGCTAGGGACATCGTTTACGGCAACTGAAGTTGGTACTTCATCAGTTTCAAGCTCCGATCTAGGAAC TTCACCATTCTTCATCTCTGAGATGAATGGTGAGTCAAAGAAAGAGGAAACTATCGAAGAAAATCAAGAACATGATGATACTAATTCAGATACAGACAGT GAAACTTTGTCCACATCTTCAGCAAGCTTGAGATTCCAGCCATGGATAGCTGATTTACTTTTACATCAACAATCTTCCCAACGCATGGCAGAAAGATCAG AGAGATCTCATAATAAGCCTCAATCATCTACGGCTAGAGCTTTGCTAGAAAATTTTTCAAGGCTCAATAGAGAAGCTGAACTTGACATCTCAACCTATAG GACTACTGAATTGAATTTTAGCAGAAATGTAAGAGAAGCAGTAGCATTATCTAGAAATGCCCCACCCGGACCACCTCCATTATGTTCAATATGTCAACAC AAGGCTCCTGTTTTCGGAAAACCTCCAAGGTTGTTCAGCTACACTGAGTTGCAGCTTGCTACTGGTGGATTTTCACAAGCTAATTTCTTGGCAGAAGGAG GGTTTGGATCTGTTCACAGAGGTGTTCTTCCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATGTTGAATTTTGCTC AGAGGTAGAAGTCCTGAGCTGTGCTCAACACCGAAATGTTGTTATGCTGATTGGGTTCTGTATAGAAGATAAAAGAAGACTGCTGGTTTATGAGTACATA TGCAATGGATCATTGGATTCGCATTTATATGGGCGACAACGGGAACCATTAGAATGGTCTGCACGGCAAAAAATTGCTGTTGGAGCTGCTCGTGGGTTAC GGTATCTTCATGAAGAGTGCAGAGTGGGTTGCATTATCCACCGTGACATGCGGCCAAATAACATTCTCATAACACATGATTTTGAACCGCTGGTTGGCGA TTTTGGCCTGGCAAGGTGGCAGCCCGATGGAGACACAGGTGTCGAGACCAGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGC CAAATCACTGAAAAAGCCGATGTTTATTCTTTTGGGGTCGTATTAGTGGAGCTTGTTACCGGGAGAAAAGCCGTAGATCTCAGTCGGCCGAAGGGACAGC AATGTCTTACTGCGTGGGCGCGGCCATTGTTAGAAGAATATGCCATCGACGAGCTTATTGATCCAAGACTGAGACACCATTATTCAGAAAATGAGGTCTA TTGCATGCTGCATGCTGCATCATTATGCATACGGCGGGATCCTCATTCTAGACCACGCATGTCACAGGTAAGTGAAATTTTTTATGCTAAATTTTCTCCG ACAAGTTTTACATTGAATAAGTTACTTGCATGTTTTTTAGAACTTGATCTAGACAGTTATAGGCTATAATCCTGAAGAATCTAAAGGAAAAGTTTGCCTG CATATCTTGTTCAGAAGGATTAGAACATGTCCCTCAAAATATGTGTAGTAATCAATTAATATATTGCTTATGTTTGATTCTTTAAATTGGTCCACTTCCC CTAAGAGGGATAGAATCAAAACCACTCTATTAATGTCACTCACATTCCTCTCTATTTTATTATGGTCCATTCTATTGCTACCTAAAAAATTCTTGATATA TGCGAAATTCGAGATTCGAGAATAGCAATGCCTTCAAATATATTATGCTTAACACTTGAGCCATATTTGTTTACATGTTGCTGTTCTACCACCTTTTGCT TCCTTACCTGACCATGATGACATACTTGTGCATGTGTTTGTTCAAGGTTCTCCGAATACTGGAGGGTGATGTGGTGATGGACCCAAATTACATTTCAACT CCTGGTTATGATGCCGGAAACCGGAGTGGTTGATTATGGACAGAATTGCAGCAGAGGCTGCATCATTAGAGTGGTTAGTGGGAAGCTCTCTCTTAATAAC AGGCCAGACTATTGGAAAGGGACAAAGGCTAGACATATATCATGTGAAAATGTCATTTAATGCTGTTCATGATGAAAATTCCATTCTTGTTATGCTAAAT ATGTTTCTTGACTTAGTATTATTATATGTATTTTTATGTATTGCAATCTAGTTCTGCAATGTATAGAGTAGAGGGGAAGTAGGATAGGTAACATACGAGT TCGTATCCTCTCTGGTACTGGAGAGGGAAGTGCCGTAATATATTGAAGCTTTTGAAATTCTTTTGAGAATTTATGTAAACTATAATGCCTGAATGGCATT TAATCAGGTTCAAATCTCTCTCTCTCACCATCTAATGCATGTGAGTTTTTTGGTCTCTTTTAATACCAGCTTTTTTGATTTGTCATAAACTCATCAATCT CCTTAACACTTTTGATCATACTTTGATAAAGCAGACAAAACATTGAAAATCAGTTAGCTTTAAGCATTGATGAGGTGTAATCATTTTTATATGTTG
• Tissue: pods
• Gene name: LI_gene_189825;
• Additional information: details;

Expression of Ll_transcript_472977

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0.9
• PS2: 2.1
• PS3: 3.1
• PW1: 0
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_472977

• Blastp: Inactive protein kinase SELMODRAFT_444075 from Selaginella with 45.42% of identity
• Blastx: Proline-rich receptor-like protein kinase PERK9 from Arabidopsis with 51.27% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SELMODRAFT_444075)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448208.1)
• Pfam: Protein tyrosine kinase (PF07714.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;