| Id Trinity | TRINITY_DN52071_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_472967 |
| Sequence | AAAGGAAATTCCAAAAACTGCTCTGGTTTGGTCTCTGACTCATGTTGTTCAACCTGGTGATTGCATTACACTGCTAGTGGTTGTGCCTTCTCAAAGTTCA GGCTGGAGGTTATGGGGTTTTCCGAGGTTTGCTGGTGATTGTGCCAATGGCCACAAGAAGTCTCATACTACAGAAACAAGTTCAGAACAAAAGACTGATA TCACTGATTCTTTCTCTCAGATGATCCTTCAGCTCCATGATGTCTATGATCCTAATAAAATAAATGTCAAGATTAAAATTGTTTCCGGGTCACCCTGTGG AGCAGTGGCTGCTGAAGCCAAGAAAATCCAAGCTAATTGGGTTGTTTTAGACAAACAGCTCAAACATGAGGAAAAGCGATGCATGGAAGAGCTGCAGTGC AACATCGTGGTTATGAAGCGTTCTCAACCAAAAGTACTCCGCTTGAATTTGGTTGGATCTCAAAAGAAGGATATTGAAGAAGCAGGTCCCTTAGCTTCTG ACCAAGATCAGATGCCTGGGAAACAAACCAAGAAGAAGAATGATTCTTTTAATTTGATAAAAGGACCAGTTGTCACTCCAACTAGCAGCCCCGAGCTAGG TACATCCTTTACTGCAACCGAAGTTGGTACCTCATCAGGTTCAAGCTCCGATCCAGGAACTTCACCTTTCTTTATCTCTGAGATGATTTGTGAGTCAAAG AAAGAGGAAACTATAAAAGAAAATCAAGAACATGATGATACTAATTCAGACACAGACAGTGATAATTTGTCCACATCTTCAGCAAGCTTGAGTTTCCAGC CATGGATCCCAGATTTACTTTTACATCAACAATCTTTTCAATGCGCAGAAGAAAGGTCAGCGAGGTATCGTAATAAGCCTCAACCATTTACAGCTAGAGC CTTGCTAGAAAAGTTCTCAAGGCTCGATAGAGAAGCTGAACTTGAAATTTCAGCCTATAGGACTGACTTGGATTTTAGCGGAAATGTAAGAGAAGCAGTA GCATTATCTAGAAATGCTCCACCTGGTCCACCTCCATTATGTTCAATATGTCAACACAAGGCTCCTGTTTTCGGGAAACCTCCAAGGCTGTTCAGCTACA CTGAGTTAGAGCTTGCTACCGGTGGATTTTCACATGCTAATTTCTTGGCAGAAGGAGGATTTGGCTCTGTTCATAGAGGGGTTCTGCCAGATGGACAAGT CATTGCTGTTAAGCAACATAAATTGGCTAGTTCTCAGGGTGATGTTGAGTTTTGCTCAGAGGTAGAAGTCTTAAGCTGTGCTCAGCACCGAAATGTTGTT TTGCTGATTGGGTTTTGTATAGAGGATAAGCGAAGGCTGCTGGTTTATGAGTACATATGCAATGGATCTTTGGATTCTCATTTGTATGGGAGACAACGGG AACCATTAGAATGGCCTGCACGGCAGAAAATTGCTGTTGGAGCTGCTCGAGGGTTGCGGTATCTACACGAAGAATGCAGAGTGGGTTGCATTATTCACCG TGACATGCGGCCAAACAACATTCTTATTACTCATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACGGGCGTG GATACTAGAGTAATTGGAACATTCGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACTGAGAAGGCTGATGTTTATTCATTTGGAGTGGTAT TGGTGGAGCTTGTGACAGGCCGAAAAGCCGTCGATCTCAACCAGCCCAAGGGACAGCAGTGTCTTACTGAGTGGGCACGACCACTGTTAGAAGAATATGC CATTGAGGAATTGATTGATCCAAATTTGAGAAGTCACTATTCAGAGCATGAGGTCTATTGCATGCTACATGCTGCATCATTGTGCATAAAGCGAGATCCT TATTCTAGACCACGCATGTCACAGGTTCTTCGAATACTGGAGGGTGACGTGGTGATGGACACAAATTATATTTCAACTCCTGGTTATGATGTCGGAAGCC GGAGTGGTTGATTATGGACAGAGTTGCAGCCGTGGCTGCACCATTAGAGTGGTCCAGTCATTGGAAGTGGTCACTGGGAAGCTCTCTTAATAACAGGTCT GCCTATTGGAAAAGGACAATGGCTAGAAAGATATCTTGTGAAGATGACATTTAATGCTGTTCATGATGAAAAATGCATTCTTGTTATGCTAAATATATTT CTTGCCCTAGTATTTTGTAGTGTTTTGTTTCTATTTTCTGCATTACAATCTAATTTTGCTTCTGTATAGGAGTAGAGGGGAAGTAAAATAGGCATATAGA AAAAGCTTTTTGTATACTAGCACTAAATGGCATTCAAATGAATCAAAAAGCTTTTTGTAAGATACTTCAATTCTCTTTTTAACCTATTAAATGCTAGTTC ATGGCAAGTCATACTTGAATATAAGACTGTACATAATGTATGAATTTTACATGGATACTTTGGTAAAGCATACAACATTGCCTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_189825; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_472967
| Blastp | Inactive protein kinase SELMODRAFT_444075 from Selaginella with 45.39% of identity |
|---|---|
| Blastx | Proline-rich receptor-like protein kinase PERK9 from Arabidopsis with 51.26% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SELMODRAFT_444075) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448208.1) |
| Pfam | Protein tyrosine kinase (PF07714.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |