Ll_transcript_472969

• Id Trinity: TRINITY_DN52071_c1_g1_i5
• Name Transcript: Ll_transcript_472969
• Sequence: GGCTACAAAAATGGAACTTGCTAGTGCTTAGTTATGTGTATGCCTCACATTGGTATGCATATTTTCTTCTTAGAGGTTTCACACTTTCACTCTTCATTAT TGTCAACTTTGCTGGGTAAAAATTGATACTGAACTTTCAATGGTGAAGACATTTCACTATTTTGGTAGTGAAATCTTTGGTAGAGGTTCCTCTTATGTCT GTATCAAAAGTGAAGACAATTACATGGATCCAAATGTTTTGAATTGGAGAGTGATTTGAAGGCTAAAAATGAATCATAGCTAGTGTCAGAGAGTGGAAGG TGTCTCCTTTGTCTATGTATCTTTTTACATCTCATGACAAGCTTTTAATCTTCTTGAACTTCAGAAACTTGAAATGCATATATTTGCATTGTGAGTTTGG GAATGCAACTCCTTGCTTTCTAAGTCAAAAAGGGTTTCTGGTTCTTCACTTTTATTGATACTATTTTCTGGGAGGTACTTGCAAAATCAAACTTGTTGGT GACTAAGTAAGAATTATATTTTGAAATGAAGTTAAAAGAGTGTTCACTAGTGGTTCTGTAGCACAAGGTTTGACTTTGGTTAAAAGGGTCTAGTCAGTGA TTGTTCTATTATTACTCGGTTGAATGTTGGCATGTTGGTGATTTTCCTCCCTTTTTGTGGTATATAGGAACATAGTGAGTGAAATCTTTTAAAGCAAGGC ATTTCGTGTGTGATTATTGGTTGCGATGAGTCGAGAACAACAGAAACGGGGGAAGCAAGAAAAAGGCTCCAATGGTGCTGAGAAGGTCATTGTTGCAGTC AAAGCATCAAAGGAAGTTCCAAAGACTGCTCTTGTTTGGTCTTTGACTCATGTTGTTCAACCTGGTGATTGCATTACACTGCTAGTGGTTGTGCCTTCAC AGAGTTCGGGCCGAAGATTATGGGGTTTTCCGAGGTTTGCTGGTGACTGTGCCAGTGGCCACAAGAAATCATATACTACAGGAACAAGTTCAGAACAAAA GACAGATATCACTGATTCTTTCTCTCAGATGATCCTTCAGCTCCACGATGTCTATGATCCTAATAAGATAAATGTCAAGATTAAAATTGTTTCCGGGTCT CCCTGTGGAGCAGTCGCTGCAGAAGCCAAGAAAATCCAAGCCAATTGGGTTGTTTTAGACAAACATCTCAAACACGAGGAAAAGTGGTGCATGGAAGAGC TGCAGTGCAACATCGTTGTTATGAAGCGTTCCCAACCAATAGTGCTCCGCTTGAATTTGGTTGGATCCCTAAAGAAGGATATTGAAGAAGCAGGTCCATC TCCTTCTGAGCAAGATGAGATGCCTGCAAAACAAACCAAGAAGAAGAACAATTCTTCAAATTCGATAAAAGGACTGGTTGTCACTCCAACTAGCAGCCCT GAGCTAGGGACATCGTTTACGGCAACTGAAGTTGGTACTTCATCAGTTTCAAGCTCCGATCTAGGAACTTCACCATTCTTCATCTCTGAGATGAATGGTG AGTCAAAGAAAGAGGAAACTATCGAAGAAAATCAAGAACATGATGATACTAATTCAGATACAGACAGTGAAACTTTGTCCACATCTTCAGCAAGCTTGAG ATTCCAGCCATGGATAGCTGATTTACTTTTACATCAACAATCTTCCCAACGCATGGCAGAAAGATCAGAGAGATCTCATAATAAGCCTCAATCATCTACG GCTAGAGCTTTGCTAGAAAATTTTTCAAGGCTCAATAGAGAAGCTGAACTTGACATCTCAACCTATAGGACTACTGAATTGAATTTTAGCAGAAATGTAA GAGAAGCAGTAGCATTATCTAGAAATGCCCCACCCGGACCACCTCCATTATGTTCAATATGTCAACACAAGGCTCCTGTTTTCGGAAAACCTCCAAGGTT GTTCAGCTACACTGAGTTGCAGCTTGCTACTGGTGGATTTTCACAAGCTAATTTCTTGGCAGAAGGAGGGTTTGGATCTGTTCACAGAGGTGTTCTTCCA GATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATGTTGAATTTTGCTCAGAGGTAGAAGTCCTGAGCTGTGCTCAACACC GAAATGTTGTTATGCTGATTGGGTTCTGTATAGAAGATAAAAGAAGACTGCTGGTTTATGAGTACATATGCAATGGATCATTGGATTCGCATTTATATGG GCGACAACGGGAACCATTAGAATGGTCTGCACGGCAAAAAATTGCTGTTGGAGCTGCTCGTGGGTTACGGTATCTTCATGAAGAGTGCAGAGTGGGTTGC ATTATCCACCGTGACATGCGGCCAAATAACATTCTCATAACACATGATTTTGAACCGCTGGTTGGCGATTTTGGCCTGGCAAGGTGGCAGCCCGATGGAG ACACAGGTGTCGAGACCAGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATAACTGAAAAGGCTGATGTTTACTCATT TGGGGTGGTTTTAGTGGAGCTTGTCACGGGGCGTAAAGCCGTCGATCTCAATCGGCCCAAGGGACAACAGTGTCTTACTGAGTGGGTAAGTCAGAATATT AGTATCTTATTTGTTACAATCTTTAATTGTCTGATATTTGCATCGTCTCAAGTGTTAAAATATCATTAATAAGAAACATGACAGGACCATAAGTTTCTTT TGTTTCGTTCCGGCCTAGCCTTGAGTAACTGTATGAGTGTTTGGATACTATTCTACAGGCACGACCACTGTTAGAAGAATATGCCATTGAGGAACTGATT GATCCAAGTTTGGGAAGTCACTATTCAGAACATGAGGTCTATTGCATGCTACATGCTGCATCGTTGTGCATACGGAGAGATCCTTGTTCTAGACCACGCA TGTCACAGGTTCTCCGAATACTGGAGGGTGATGTGGTGATGGACCCAAATTACATTTCAACTCCTGGTTATGATGCCGGAAACCGGAGTGGTTGATTATG GACAGAATTGCAGCAGAGGCTGCATCATTAGAGTGGTTAGTGGGAAGCTCTCTCTTAATAACAGGCCAGACTATTGGAAAGGGACAAAGGCTAGACATAT ATCATGTGAAAATGTCATTTAATGCTGTTCATGATGAAAATTCCATTCTTGTTATGCTAAATATGTTTCTTGACTTAGTATTATTATATGTATTTTTATG TATTGCAATCTAGTTCTGCAATGTATAGAGTAGAGGGGAAGTAGGATAGGTAACATACGAGTTCGTATCCTCTCTGGTACTGGAGAGGGAAGTGCCGTAA TATATTGAAGCTTTTGAAATTCTTTTGAGAATTTATGTAAACTATAATGCCTGAATGGCATTTAATCAGGTTCAAATCTCTCTCTCTCACCATCTAATGC ATGTGAGTTTTTTGGTCTCTTTTAATACCAGCTTTTTTGATTTGTCATAAACTCATCAATCTCCTTAACACTTTTGATCATACTTTGATAAAGCAGACAA AACATTGAAAATCAGTTAGCTTTAAGCATTGATGAGGTGTAATCATTTTTATATGTTG
• Tissue: pods
• Gene name: LI_gene_189825;
• Additional information: details;

Expression of Ll_transcript_472969

FPKM

• PAB: 4.2
• PNAB: 0.5
• PS1: 3.2
• PS2: 7.7
• PS3: 9.9
• PW1: 0.4
• PW2: 2.1
• PW3: 5.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_472969

• Blastp: Inactive protein kinase SELMODRAFT_444075 from Selaginella with 44.47% of identity
• Blastx: Inactive protein kinase SELMODRAFT_444075 from Selaginella with 56.87% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SELMODRAFT_444075)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448208.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;