Ll_transcript_472971

• Id Trinity: TRINITY_DN52071_c1_g1_i7
• Name Transcript: Ll_transcript_472971
• Sequence: AAAAGAGTGATATAACTGATTGTTGTTCACAGATGATCCTTCAGCTCCATGATGTCTATGATCCAAATAAGGTTAATGTCAGGATTAAAATTGTTTCCGG GTCACCTTGTGGAGCAGTGGCAGCAGAAGCCAAGAAAGTCCAAGCTAGTTGGGTCGTATTAGACAAACAGCTCAAACACGAGGAAAAGCGATGCATAGAA GAACTGCAGTGTAATATTGTGGTTATGAAACATTCCCAACCGAAAGTACTCCGCTTGAATTTGAATGGACCGCAGAAGAAGGATCTTGAAGAAACACGTC CTTCACCTTCTGATCGAGACGAGATGCGTGAAAAGAAAACCAAGAGCAAGAGTGATTCTTCAAAATCAATTAAAGGACCGGTTGTCACTCCAACTAGCAG CCCAGAGCTAGGGACACCTTTCACTGTAACTGAAGCTTGTACTTCATCAGTTTCAAGCTCTGACCCAGGAACTTCACCATTCTTTATCTCCGGTATGCAC GGCGAGTTAAAGAAAGAAGAAACTATCAAGGAGAATCAAGAACTTGATGATACTAATTCAGACACGGAAAGTGAAAACCTGTCTACATCTTCGGCAAGCA TGAGATTCCAGCCATGGATCACAGATTTACTTTTACATCAACGCAATGGAGAAAGATCGGATATATCATCTCATGATAGGTCTCATCATTCATCTACAAC CAGAGCTTTGCTAGAAAAGTTTTCAAGGCTTGATAGAGGAGCTGGAATTGAAATGTCGGCTTATAGAATTGACTCGGATTTCAGTGGAAATCTAAGAGAA GCAATAGCATTATCTAGAAATGCACCACTCGGTCCACCTCCATTATGCTCAATATGTCAACACAAGGCACCTGTGTTTGGGAAACCTCCAAGGTGGTTCA GCTATGCCGAGTTGGAGCTTGCTACCGGTGGATTTTCACAAGCTAACTTCTTGGCAGAAGGAGGATTTGGATCTGTCCACAGAGGGGTTCTACCGGAGGG ACAAGTCATTGCTGTCAAGCAACATAAGTTGGCTAGTTCCCAAGGTGATGTTGAATTTTGCTCAGAGGTAGAAGTCCTGAGCTGTGCTCAACACCGAAAT GTTGTTATGCTGATTGGGTTCTGTATAGAAGATAAAAGAAGACTGCTGGTTTATGAGTACATATGCAATGGATCATTGGATTCACATTTATATGGGCGAC AACGAGAACCACTAGAATGGTCTGCACGACAAAAAGTTGCTGTTGGAGCTGCTCGTGGGCTACGTTATCTTCATGAAGAGTGCAGAGTGGGTTGCATTAT TCACCGTGACATGCGGCCAAACAACATTCTCATAACCCATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACC GGTGTCGAAACTCGAGTAATTGGAACTTTTGGGTATTTGGCTCCTGAATACGCGCAAAGTGGCCAAATCACGGAAAAAGCCGATGTTTATTCCTTCGGGG TGGTACTAGTGGAGCTTGTTACCGGGAGAAAGGCTGTGGATCTCAGTCGGCCCAAGGGACAGCAATGTCTTACTGAGTGGGCGCGGCCGTTGTTAGAAAA ATATGCCATTGAGGAGCTGATTGATCCGAGACTGCGAAACCACTATTCAGAAAATGAGGTCTACTGTATGCTACATGCTGCATCATTGTGCATACGACGA GATCCTCATTCTAGACCACGCATGTCACAGGTTCTCCGAATACTGGAGGGCGACATGGTCATGGACATGAGTTACATTTCAACTCCGGGTTATGATGTGG GTAACCGGAGCGGTCGAATATGGTCAGAGCCATTGCAGAGACAGCAGCACCATAGTGGTCCCCTGGTAGAAGAGTCACTGGAATCATTCAGTGGGAAACT ATCCCTTGATAAATACAGGCCTACCTATTGGGATAGGGACAAGGGTAGGAGGACATCATGTGAAGATGACATTTAAAGCAATTGATGATGAAAATTACAT ATCTTGTTATGCTAAACATGTTTGTTTCGGGTGCACATCTTCTGTCCCACAATATGTGTCACTTCATGTGCCATAAGCTGTAATTGGTCAGAAGGATACT TAATAATTAAACTTTTAACTTACATCCATTTTTCCAACCAATCACAGCCTAATAGCACGTGAAGTGTCACATATTATAGGATAAAGATGTGTTTCCGTTT GTTTCCCACTTACCCTCCTATTTGGTAGTTTTGTTTATGTTTTTTCTGCATTGTATAGCAGAGTGAAAGTAGGGTAGATAAATATAGAAGCTTTTGAAAT TCTTTGGGAAATTATTTGAGCTATCTATGGTCTTGAAATGGATGAAAAAAATGGTTTTTGTAAGGTGGTTCAATGCTTCCCTCTCCAATGAAACAAACAT GTAAATCATTACTTGCATGCATTGAGAACCAAGCAAACTTGGGTTGTTAACAATAATGCTTGATGCAATTTTTTATAAAAAATAATAAAAGAAATAATAT TAGACAATGAGAGAAAGTATATAAGATGTTCT
• Tissue: pods
• Gene name: LI_gene_189825;
• Additional information: details;

Expression of Ll_transcript_472971

FPKM

• PAB: 0.2
• PNAB: 6.9
• PS1: 5.8
• PS2: 3.8
• PS3: 4.7
• PW1: 3
• PW2: 1
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_472971

• Blastp: Inactive protein kinase SELMODRAFT_444075 from Selaginella with 46.85% of identity
• Blastx: Proline-rich receptor-like protein kinase PERK13 from Arabidopsis with 53.62% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SELMODRAFT_444075)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456330.1)
• Pfam: Protein tyrosine kinase (PF07714.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;