| Id Trinity | TRINITY_DN52072_c5_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_473617 |
| Sequence | CTTCAAAGCCTCAAACTCAGAAATCAGAATCATCCACTTTCCCTCACACAATAAGACCATAGAAGGAGAGAATGGCTATACTTCTGAACCTTGAAGAATT AAGAAAGACAAGTTTGATTATTAATTTCACTGCAACTGAAGGAGACATCCAAAGGGATCGCATTGATCCAAGATTGTAGTCTTAAATCTCTCTTTGCCTT CACAGAATATTTTGGATCATGCTATCCCTTTGGATTCTTCCTTTGGTGGCTTCTACCACTTTTCACACAGAAACTGCATTCTCTAGCTAAAAAAGATCAC GGCATATATAGTTCCGCAAGTTGAACATGGTTGAATTCATATTTCAAATCTGAAGTACTCAAAGATATATCAGTTCTTCAGTCCCAGGTGCTTGGATCCT ACCAAGGTAAATTATTCTTGTTGAAAGTTGTATCTCGTTATTCTTTCACAACATTCAAGTTATGTTCCAGCTTCGCAAGGTGAAGTACATAAGGAAACCC TTTCGATGTTTAATTCTATTATGTAGCCTAGCTTGGAGTTTTTGTTTTGGTAGGATAGATTGTTCTACCATGAGTCCATGAGTTTTTTTTATCTCTTTAC TAAAATGTTGTTGAGTATATTATCCTTGAAGTTTGGGTCGTTGTGTTAAAAAACAAAAAACAGAAAGAAACTAGCAGCCTTTTGGTGAGAAAATAAGCTA GATTATTAAAGCTAAAGTGGTAGGTTGTATTTATGAATATGTGGTTGTTTTTCTCCTATAGCTTCTGCCTTCAACCAAAATTCATTCATATCTTTATTTC CACATTACTTTTTTTATGGATTTTCTTCACTCTGAAATTAATGTATTTATGAATATGTGTTTTTCTTAGCCGATGTCCTTTAGCTTGGGACAAGATCACC TATCCCAAACCATATCTCAATTGGTGTATCAAGTCAATCAAAATATTACATTTTGTTATTTTTTATTTATAATTTTTTTATGTTATGTGGCAAAATCTTA TTGGTTTGGGACACACCCATCGAATTCAGTACAAGTAATCCCCATCCCTACGACACACCCATTCCATAGAGATCTATATAAGTAGCAGATTCTACAGCTC CACCATACACCGACTTGAACGGAGCAGAACCGCTCCATCTCCGCCGCACGTGCACGCCGGAAAATTAAATTCCATAACTTCAGATTTTAAATAACTAAAA AATTACGCCGCGATGAGTAATTCTGAGTCGAGAGAAGATGAATCGAAAGAAGAGGATAAGGACAACGAAGCTAACAAACTCCTACAACATCAATCATCAT CATCATCGGATAATGAAGAAGAGGTTGCATATGAAAATGGAGATAAAATCACGATCGTAGATTTCGACTATGTAGACGGTGATGAAGATTCAAACGTAAC ACCTCCTTTCTCATGGAAGAAGCTATGGGTTTTTACGGGACCAGGGTTCTTAATGAGCATAGCGTTTCTGGATCCAGGGAATCTAGAAGGGGATCTCCAA GCTGGAGCGATTGCTGGTTACTCTCTGCTATGGTTGTTGATGTGGGCCACTGTTATGGGGCTTTTGATTCAGCTTCTATCAGCGAGAGTTGGCGTCGCCA CTGGTCGCCACCTTGCTGAGTTGTGTAGGGATGAGTACCCTAATTGGGCGAGGTATGTGCTTTGGTTTATGGCTGAGTTGGCCTTAATTGGTGCTGATAT TCAAGAGGTGATTGGGAGTGCAATCGCTATTCAGATTCTTAGCCATGGCGTGTTGCCGCTTTGGGCTGGAGTTTTGATTACTGCTTCTGATTGTTTTTTC TTTCTATTTCTTGAGAACTATGGAGTGAGGAAATTGGAAGCTGCTTTTGCAGTTCTCATTGCGACTATGGGTCTTTCTTTTGCTTGGATGTTTGCTGACA CAAAACCTAATGGAAAAGAACTATTGATGGGTAAATCTTATAAATGATATAGCTGAAATATAAAATTTTAATATGACTTTCTGTATTTTTTTAATAGCTT GCCCCTCTCTCTGGCATTTCAAAGACATAAAAAATGTCCTCTAATAATCCTAATGGATAATCACGTCTGTTACTTCTGGTAGGTATTTTGCTGCCAAGAC TTAGCTCGAAAACAATTCGTCAAGCTGTGGGTGTTGTGGGTTGTGTCATAATGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_189835; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_473617
| Blastp | Metal transporter Nramp2 from Arabidopsis with 76.69% of identity |
|---|---|
| Blastx | Metal transporter Nramp2 from Arabidopsis with 82.78% of identity |
| Eggnog | H( )-stimulated, divalent metal cation uptake system (By similarity)(COG1914) |
| Kegg | Link to kegg annotations (AT1G47240) |
| CantataDB | - |
| Mirbase | tcc-MIR393a (MI0017505) |
| Ncbi protein | Link to NCBI protein (XP_019417585.1) |
| Pfam | Natural resistance-associated macrophage protein (PF01566.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |