| Id Trinity | TRINITY_DN52074_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_474470 |
| Sequence | ATTTTTGTGAGTAACAGAGCCATACTCAATCACCTTCTTCTCTGGGTATCGCAAAGTTCACATTTTTTAAGCTTCAAAGTTGATACCATGTCTATTACTA ATTGGGAAGCCGATAAAATGTTAGATGTGTATATCTACAATTATCTTGTGAAGAGACAATTACACACATCCGCAAGTGTATTTCAGGCCGAAGCAAATGT TCCAACCGATTCTATTGCTACAGACACACCAAATAGTTTTCTCTTCGAGTGGTGGTCTGTCTTTTGGGACATATTCATTGCTAGGACTGGTCAGAAGCAC TCAGAAGCAGCAGCATTTTACATCAAGAGCCAACAACATAAAGCTCAAGAAATGCAGAAGCAACAAGAGCATCAGAGTCCAATTCCAAACCAGAACCAAC AAATGCAAATGCAGCTCTTATTGCAGAGGCATTCCCAGCAGCATCAGCAACGCAGTGATGGAATTGGAACTCCACTTGTTAGTGGCAGTACAAGCAGCCC TATTAGCAATGATCCTTTGATGAGGCTGAACCGTGCAGCTTCTAATGCTATGGCAACAAAAATGTATGAGGACAGATTGAAACCTCCAATCCAGAGAGAT GTTTTAAGTGATGCAACCATCAAACATAGGGTAGGTGGTAATGTTGGTCAGCTTCTGGAACCAAATCACGCCTCATTGCTGAAAGCAGTAGAAGCAACAA CTAGCGGACAGTCTACAAGGCAAACATTGCTTGCTGCACTTAGCATTTTACAGGGGAATCTCCAAGTTCAAAATCCGAATCCGCTACTTCCAGGGTCTAC ACAGGACATAATGAGTGATACAAGTGCAATGATGAGGTCTCAAGCTGTTGTTTCAGAAGGGTCATATATTGGTGGTCATGGTTCAAATCAAGGTGGTAGC AACTTGACTCTGAAAGGATGGCCTTTGGCGGGACTGGACCAGCTTCGCTCTGGACTTTTCCACCAGAATAACTTGATGCAGTCTCCACAAGCTTTCAATC AGCTTTCACCACCGCAGCATCTTATGCTTCAGGCACAGCAGAATTCGTTTCCCCCATCTGTCAGTGATTTTGAGAGCAGGAGGCTCAGAGCTCTTCTTAA TCAAAATATTGGTCTTGGGAAAGATGGCCGATTAAATTCTCTAAGTGATTTAATTCCTAATGTTGGAACACCTTCACAAGCTGGTTCTCCTATGTTGCCT CATCTAGACTCAGATATGTTCCTTAAGCAAAAAGATCAAAAGAGTAATCAGCAGCCTCAACAATTTTCACAAAATACTCTTTCAAGGCAACAGTTTCAGA GGCTCCAACGCCAAGAAAAAGTTGGTTCTGGCAACATAGTAGATGGCTGCATGTCCAGTACCTTACTAGGAAATGACCAGGCTTCCAAAAGTCAAGTTGG CCGGAAGCGAAAGCAAGCAACATCTTCAGACCCTGCCAATAGCTCTGGAACTGCAAACACTACAGGACCATCTGCCAGCTCACCTTCAATACTGTCTACG CAAACACCAGGAGATGTTACGGCCGTGCCAACTGTGCAACAGAATGTTCCTTCTTCTAAGTCATCACTTATGTCTGGTACTGATGGTTTGGGCTCACATG CATCAGCACAAAATCAATTGGATGATATGGACCGCCTCGCGGGTGATGGATCTTTGAGTGACAATGTTGAGTCTTTCTTATCTCCTGATGATGCAGACCC CCGAGATAGAGTTGGCGAAGGATTCTCATTCAAGGAGATCAAGCATATAATGGCAAGTACACATAAAGTTGAGTGTTGTGATTTCTCATCAGATGGAAAA TTGTTTGCTACTGGTGGCCAAGATAAAAAGGCTAATTTGTGGTGCACAGAATCATTTCACATGAAATCGACACTTGAAGAACACAATCAATCGATAACTG ATGTTCGGTTTAGTCCAAGCATGTTGCATGTCGGCACATCCTCTGCTGATAAAACTGTTAAGGTTTGGGATGTCGATAACGTGAGTCAAGATTTTCATCG GTCAAATTCAAAATTTAAAGTTCAAGTGTTCATTATTTCTTTTAACTTTAGCATATAAATTGATGGAATTTGATAACACTCTGCAGCCTGGTTATTCTCT TAGAACATTCACAGGGCATGCAACAACTGTAATGTCACTAGACTTTCACCCAAGCAAACAAGACCTTATTTGCTCCTGTGATAATAGTGAGATAAGATAC TGGAGTATAAAAAATGGTAGTACTGCTGGGGTTTTCAAGGGTGGTGTAACTCAGATGAGATTTCAACCTGGTTTGGGAAGGCTTCTAGCTGCAGCAGTAG ATAACCTGATATCCATTCTTGATGTGGAGACCCTGGGTTGCATACTTAAATTACAGGGACATAATAACAATGTCAGAAGTGTGTGTTGGGAATCTTGTGG AAAATATCTGGCATCACTTAGTGATGATCTAGTTAGGGTGTGGACAGTTGGATCTGGTAGCAAAGGGGAATGCATTCATGAGCTGAATGCTACTTCTGCC AACAAATTCATTACATGTGTTTTCCATCCCTTCTACCCTTTGTTGGTCATTGGTTGCCATGAGACACTTGTGCTGTGGAACTTTGGTGAGAACAAGACAA TGTCTCTACATGCACATGACAAGGTTGTGTCTGCATTGGCAGTATCAAATGTTAATGGGTTAGTGGCTTCAGCTAGCCATGACAAATATTTCAAGATCTG GAAGTGACAACATAGCTACTCTGCTTAAAATCAAACACTCATGGGTTTTCTGTATAGCTCCCTACTTAGCAAGTTAAAGGGAAGTTTTGAACTATATAAT TACAAGGATATACTTTTTGGTTTAGAATTAGAAGAAAAAAAGGTATATAGTTAAAGTGGCTAACCATAATTACAAATACTTCAATACTTGTCTTGTAATT ATACCTTAGAAAATTATATTATCATATATCTGCGCTTATTGTATGTTCATGTCATCATGTGTTGATGTTGCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_189857; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_474470
| Blastp | Transcriptional corepressor LEUNIG from Arabidopsis with 46.85% of identity |
|---|---|
| Blastx | Transcriptional corepressor LEUNIG from Arabidopsis with 47.61% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT4G32551) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439576.1) |
| Pfam | LisH (PF08513.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |