Ll_transcript_473484

Id TrinityTRINITY_DN52077_c2_g1_i23
Name TranscriptLl_transcript_473484
SequenceAAACGACCCCACTTTGGTGAAAATGCCCATAGAATTACACAAAGTAAAATATAAATAAAATATGATAAGTTCTATTTTCCTAAATTCCTATCCAGTCTTT TCCTGATTCTGATGCGGAAGGTTATTGCAGAAGCCCCAACCCTTTCTCCCACCTCCTCCTAAATCGAACCAGGATATCCTATTTTCATCCGAGACCGGTG ATGATAAATTGGTGACAAAATGATGTTGGCGTTTTAAGCTGATTATTAAACTTTGCCCTCTTAGTTCCATTGGATTTTGAACCATATTTAAGATGGGCAA AGGGCTGCTGCAATAATTAAAGTCAGATGAAAATCCAAGAGACCGGTGTTGGCAGAGAGGCTGAAGTTATTAGTAATGGCTTTGAGGTTTATAACGATTT CGGCAATTTCAACGGTGCTAAGTTTTGTGGGTCTGCAGTTTTGCGCAAACTTCTCTTTAGATACACTTAAATCAGATGGTCTACTTGGCTGGGATGTAAT GCAATTGGACAATGCCAACCATGACACAAACTTACCTTTGGGTTTGTTTACTACTGTAGGGCTACTTGCGAATTGCACGATCAATCTATTTATCCTTCTT AATCTTTGTCTGAAGGCTATGTTCTTCACAGAGTTGTATTCTTCTGAAACTCGTAAATTAATTGAGCGTCTCATTAATTATGTTGTTTACAAGGGGATGT TCCTACCACTTATTGTGCCACCAACTATATATCAGGCTGGTCTTTGGTCAACTTGGCTGGCAGTGCTCTGTTCTTTAAAGATGTTTCAAGCTTTAGCCAG AGATCGCTTAGAGCGGCTGAATGCATCTCCATCTGCTACACCCTGGACATATCTTCGTGTATATTCAGCATTGTTATTCGTTTTCTTGGTTGATGTTTTC TGGATAAGGCTATGTCTGGCAATATATAGAACACACAGGTCCTCTTTGTTTCTGTTACTATTCTTTGAGCCTCTCAGTATTGCTTTTGAGACCCTACAGG CAATTTTGGTACATGGATTTCAGCTAGTTGATATTTGGTGCAACAGCAGTGATTGCCAAAGGCCTAAACTGTTTGACAAATTAGCAGCAGGTTCACTATT GGAATGGAAGGGAACTCTTATTCGAAACTTGGGATTTTTCCTCGACATGGCAACTTTTTTTATGGCACTAGGCCATTACCTGTATATATGGCGGCTCCAT GGCATGGCATTCCATCTTGTAGATGCAGTGCTATTTCTAAACATACGTGCATTACTTAGCGCAATTCTAAATCGAATAAAAGGCTTTATTAGGCTAAGGT TAGCTCTAGGAGCTCTTCATGCAGCTCTCCCCGATGCAACAACTGAAGAGCTAAGAGCATACGATGATGAATGTGCTATTTGTAGAGAACCCATGGCTAA GGCTAAAAAACTAAACTGCAATCACCTCTTCCATCTTGCATGTTTGAGATCTTGGTTGGATCAAGGCCTGACTGATATGTATACTTGTCCTACATGTCGA AAGCCTCTTTTTGCAGGCCGACCTGAAAATGACGCAAACTCCACTACGGAGATATCAAGCGATGAGCAACTTGCACGCCAAATGAGTACAGGACTTGGTC AGGCAAACTCTGCTAATACCATCCCTGCAGGATTGCATCCCAATCAGACACCAAATTCTGTGGAAGGTGTTCCTTGGAGAGTGATACAAGAGGCTAGTGA AAGACGGGTTGAAGAAGAATCAGTTCAGAAGCCGCACCATGTATGTGATATCCTGGGTATAATCAAGACCATTGGATCACATCACTGGAAAGTGAAACTG CACCAGAGCTGAATGGATTGCAGTATTGCACAAGTTAATGGGTTGAAGTTATAAAATGGTATCTGTAGGTTGGCATTATCCACCAGACAATTGGGTGAAG TGTAATGTTGATGTATTGGTTCGAGATCGAAGGTCCATGGTTTGCTGTGGACGGGCCTTGCATGATGCTTCCGGAGCTTGGCTTAGGATTTGTGCAGAAC TTGGGCTCCTCAGGCATGCTCATGGCAAAGTTGTGGGGCATTTTTATTGCCCTTGAAATTGTGTGGGACAGATTATGCTGTCAGTGGTATTCAGGTTGTG GTCCTTCTCATCCATACTTTACAATAGCCCAATCCATCCAGTGTTTCCACAACAAGCAGAGGGTTATTAGTCATATGCATGGTTTTAGGGAAGGAAACCA AGTTGTGCATTGGTTGGCTAATTATGCAGTCATTGGATATTGGCTTGCATATTTTGGACCATCCTCTTTGAAGATGTGCTGCCCTTTATCAGGTTTTGAT GGGTTTTTTCTTCCATCGTAGGGCACTTGTTTAGTTGTGCCGATTGCCTTCCCCTGTGCTCAAAACAGAATAGCAGGTACATGGCAGTGTGGCACAGATA TCAGGGCATGTACCTTCTTAGGCCTGTGTCTGTAAAAACACATTTAGAAAATAGAAGAAGAGTGGGTTGTCTTTGCCCTGGGAACTATTTCAGAAAATAC TTGGAAGAAAATTCCATGCCAGATTGCCAGTTCGGTTTCAAATCAAATGCCACATGGCAAGCATAAGAATCTGGACAGTTGAAGATTTATACCTTTCATC CCCGGATGATGCTATTCTTCTACATTCTATCTTTTTATTGTCTGTATCTGACTGTAAAAGAATACATGTTCAAGAATCAAGATGAGTGATGGATACTGAC TCTGCATTAATATGATCTCAGTAACTGATCTATGGGACTATTTCACGATGCAATTAATTTATCTAACCTCTTGATTTGTTGCAAGAAATACTGGTTGAAA CCCTTTACTTTTTATTGAGAGCCTTCTTAATTACATACTGGGATCAAAATGTATGCATTTGTTATTGAAAGTATTGATTTACTTAGTTTTTTGCTTATTT TAATTTTTCTTATGTAGGGGTGCGGGACTGGATGCAGGTTGGTTGCACTCATGGCCAAATCAAGGTGTTGATGGAGCTGGTCCATC BLAST
Tissuepods
Gene nameLI_gene_189875; 
Additional informationdetails; 

Expression of Ll_transcript_473484

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_473484
BlastpE3 ubiquitin protein ligase RIN2 from Arabidopsis with 65.6% of identity
BlastxE3 ubiquitin protein ligase RIN2 from Arabidopsis with 65.6% of identity
Eggnogzinc ion binding(COG5243)
KeggLink to kegg annotations (AT4G25230)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419130.1)
PfamRing finger domain (PF13639.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;