Ll_transcript_474652

• Id Trinity: TRINITY_DN52081_c2_g3_i1
• Name Transcript: Ll_transcript_474652
• Sequence: AACATGTCAAGTTAATCAAAAAAATTAAAAATTCATATTTTTATTTATTTTTTCTTCGTTCTTATTGATTTGGTGTATGGTTAGGGACATGCTTTGGGAC AAGTTATCCTCGTCACGTTAGATGACTATAAAAGTACACTATTAATAACACTGACACACACTCTTCAGTTATTGGAAATGAGAAACACAAAGACTTTAGC ATCAGAGTCTCTCTCCACTTTTCTCTTGTTTTGTTTCTATGGCACACTAATCAATGCTAAATACATAAACTATGATACTGGTTCTAACATAGTTGAAGCA AAATTGAACATTCACCTAGTACCTCATTCTCATGATGATGTTGGTTGGTTGAAGACTATTGATCAATACTATGTTGGATCAAACAATAGTATTCAGGGGG CATGTGTTGAAAATGTGTTGGATTCATTGGTTGTTGCTCTTCATAAAGATCCAAACAGAAAGTTTGTGTTTGCTGAGATGGCATTTTTCCATAGATGGTG GGTAGAACAAAGTCCAGAAACACAAAAAGAAGTTAGAAAGCTTGTGGATGCTGGGCAACTAGAATTCATAAATGGTGGATGGTGTATGCATGATGAAGCC ACAACTCACTACATAGACATGATTGACCAAACCACTTTGGGTCATGGCTTCATCAAGGATCAGTTTAACAAAACCCCTCTTGCTGGATGGCAAATTGACC CCTTTGGACACTCTGCTGTACAAGCTTATCTACTTGGTGCCGAGCTTGGTTTTGAATCAGTTCACTTTGCGCGGATTGATTATCAGGATAGAGCTAAGCG CAAAGGTGATAAGTCTCTCGAAGTTGTGTGGCGCGGGTCAAGAACATTTGGTTCTTCAGCTCAGATTTTTGCCAATGCATTTCCGGTTCATTATAGTGCT CCGAGCGGTTTTAATTTTGAAGTCAATAGTAATGATCCTCCATTACAGGACAATCCTCTTCTTTTCGATTACAATGTTAAACAGCGTGTCGAGGACTTTA TCAATGCCGCTACTACCCAAGCAAATGTGACAAGGACGAACCATATAATGTTTACGATGGGCGACGATTTCCAATACCAATATGCAGAAACTTGGTTCAA GCAAATGGATAAATTAATTCACTATGTTAATAAGGATGGTAGAGTGAATGCCTTGTATTCTACTCCATCTATTTACACCAATGCAAAGAATGCTGCAAAT GTATCATGGCCACTGAAAACCGACGATTACTTTCCGTATGCGGACGGACCATTTTCGTATTGGACCGGATTTTTCACTAGTCGCCCTGCGCTTAAAGGAT ATGTTAGGTTGCTAAGTGGATACTATTTGGCAGCGCGTCAACTTGAATTTTTCGCTGGAAAGAGTTCAACTATATCTCATACTCTTGAACTAGGCGATGC TCTAGGAATTGCGCAGCACCACGATGCTGTCTCTGGCACTGCCAAACAGCATACAACAGACGACTACGCCAAACGACTCGCTATTGGAGCCTCTAAGGCT AAAGCAGTAGTTAGTTCTTCTTTGGCTTGTCTTTCTAGTAAGCAATCCAGTAATCAATGTTCAGCACCTGCATCAGCATTTGCTCAGTGCCAATTACTGA ACATAAGTTACTGTCCTCCAACAGAAGAAAATATTCCAGAAACCAAAAGTTTGGTAGTAGTGGTTTATAACCCACTAGGATGGAACCGTACTGATATTGT CAGAATACCAGTTAATGATGTGAATCTTGTTGTCAAAGATTCTTCTGGAAATAACATTGAAGCACAATATGTTGATATTGATGAAGTTACAACAAATTTA AGAAAATTGTATGTGAAGGCCTACTTGGGTTTGTCACCAAAACAAGCCCCCAAATATTGGCTTCTGTTTCAGGTCTCAGTACCTCCACTTGGATGGAGTA CTTTCTTCATATCTCAACCAATTGGAAATGGAAAAGGTAGAAATGGATCTATCTCGCTCGGCAGGGCTCGGAAAAGTGACAACATTGACATAGGACCAGG GAATCTAAAGTTGTCATTTTCTTCAACCTCGGGACAACTCAAACGGATGTATAATTCCAGAACTGGAGTTGATATACCAATTCAGCAAAGCTATCTGTGG TATGGTTCTAGTGAGGGTGATATTTCTGATTCTCAGGCTTCTGGTGCGTATATCTTTCGGCCAAATGAATCCCCTCCGACCGTTGTTCCAAGATCAGTTC CTTACGAGGTAATCCGTGGACCGCTAGTTGATGAGATTCGTCAGAAGTTTAGCTCTTGGATTTACCAGGTGACTAGGCTGTACAAAGACAAAGATCATGC TGAAATTGAGTTCACTATCGGTCCAATTCCTATTGATGATGGAGTTGGAAAAGAGGTGATCACACGATTGGCGACGAATATGGTTACAAACAAGGAGTTT TATACTGATTCTAATGGAAGAGATTTTCTGAAACGGGTTCGAGATCATAGGGAAGATTGGCCGCTGCATGTTACTCAACCGGTAGCAGGAAACTATTATC CACTTAATCTTGGAATTTATACAAAGGATAAGAATTCTGAACTCTCAGTTTTAGTTGATCGTGCCACTGGCGGAGCCAGCATCAAAGATGGTGAGCTAGA ACTTATGCTTCACAGGCGTATTCTCAATGATGATGGTAGAGGAGTCGGGGAAGAACTCGACGAGCAAGTTTGCTTGAACAGCTTTACATGTGAAGGACTA ACAGTATGGCAATATCACCAATCAGTTTATACATTTATGCTTCCTCACCAATGTTTTAATTTGCACACTGCAACCACAATTGCGGCATCAACATTGTAGT TTCGTGAGTCTCCACAATTGTGATAAACACAACGTAAGAGGAAATTATTATATAAGCATTGACAAGATTGGAGAAGGCTCGCGCTGGCGCCGTAAAACCG GTCAGGAAATTTACTCACCGATATTGTTGGCTTTTTCGCACGAGAACTTGGAGAATTGGAAGTCCTCTCATTTGACCAAGGGAACTCTTATGGATCCAAA TTACAACTTGCCTCCTAATGTTGCTCTTATAACTCTTCAGGAGTTAGATAATGGAATTGTGCTTCTCCGTTTGGCACATCTCTATGAGGTAAATATATAA TCCTATCATTATCCACTTTGAGATGAATCAATCCAAAGAAATACAACTAAAACTCAAAAGGATAGAGTGTACCAAGTACCATTTCCGACCCGAAGGGTAG GGCATACAGGGCGATTGTTCGGCCGATGAAAAAGCGGGAGTTCAGTTTTATTTGATGTTATACTAATTTTGTTATGCCGATGATGAGTGTTTTAAATTGC GGATGTGATTATGGCCGAGGTTGCAGTTATTGCGATTGTGATTATTGCAATCATTATGATGCGGATTATGGTCGTGACGTTGTGAACTCTTTTAGGTTTA AAAAACGTTTTCGAGTTTGATGTAGTCCATGCAGCCCAAATATGATATGATGTGGTTGCGTTGCACTCTGATACGGACACATTATTGTGATTCAATATCA CATCACAATTGCGGGGTGATGTAGTAACAGAAGCAAACACAACTGCATTTTGTGGCTGCATCAGATAATGCGGTTCGCAATTTGATAGACCGACACTTGT CGTTGTTGCTACTTTAATGATTGAAAGTAAACACACTAGAAAATGTCAAGAATTGCAAATACATTCACATCTTTCTTTCATGTTTTCAATGTGGTTAGAC AAATGAAGATGCTGAGTATTCAACTTTAGCCAAAGTTGAACTAAAAAAGCTGTTTGCCACAAAAACTATAAATGAGTTGAAAGAAGTGAATTTATCAGCT AACCAACACAAATCAGAAATCAAAAAAATGGTATGGAAGGTTGAAGGGGACAAAGGGCAAGAATCTGAAGTAGTTAGGGGTGGCCCAGTTACTAGTCCTG ATTATGTTGTTGAGCTTGGTCCTATGGAAATACG
• Tissue: pods
• Gene name: LI_gene_189895;
• Additional information: details;

Expression of Ll_transcript_474652

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0
• PS2: 0.1
• PS3: 0.1
• PW1: 0.1
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_474652

• Blastp: Alpha-mannosidase from Canavalia with 75% of identity
• Blastx: Alpha-mannosidase from Canavalia with 75% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_003548841.1)
• Pfam: Glycosyl hydrolases family 38 N-terminal domain (PF01074.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;