Ll_transcript_474658

• Id Trinity: TRINITY_DN52081_c2_g3_i5
• Name Transcript: Ll_transcript_474658
• Sequence: AAAAAATTAGAGTAGTGCTTATTTTTTTTAATTTTTAAGTGAACCGTCTGGTTTAGTTCATGTGTTAATCCAGTTTAATCGGGTTTATCACGGTCCGACC GTTACTTCCCTGGTTTAAAGTGGTCCAACTCTCATTTGTTTAAGTTGGTAAATCAGAACCTTTTTTAGTCCGGTTAGCGGTCAAACTGGTCGGATTGTCT AGTACGGTCCGGTTCTAATAACACTGCACCAAACACATGTTTTTTTACAAGATTATACTCATATCTCCTGGAGGTGACTAGTGTAATGTAAGTATATAAA ATATGAGTGATTTGTGTAGGATAAAAAGATGAGTGATTAGTGTAATGAATTTAATACGTATACAACAGTGTAAGTGCAAATATTTTTTACACCGTCAGCA AATCATTCACCATTGATTTGTTAACCATCATTGGTGAATGATGCATTGACGGTGTAAAAAGCTCTACACTTGTCAGTGCATAGATTTTAAACTCTTGTGT AATTTCAATAAAACATGAATATGAAATTCTAATATGATGCTAATGGTGACAATGTGCATTAGGTTAATGATGTGAATCTTGTTGTCAAAGATTCTTCTGG AAATAACATTGAAGCACAATATGTTGATATTGATGAAGTTACAACAAATTTAAGAAAATTGTATGTGAAGGCCTACTTGGGTTTGTCACCAAAACAAGCC CCCAAATATTGGCTTCTGTTTCAGGTCTCAGTACCTCCACTTGGATGGAGTACTTTCTTCATATCTCAACCAATTGGAAATGGAAAAGGTAGAAATGGAT CTATCTCGCTCGGCAGGGCTCGGAAAAGTGACAACATTGACATAGGACCAGGGAATCTAAAGTTGTCATTTTCTTCAACCTCGGGACAACTCAAACGGAT GTATAATTCCAGAACTGGAGTTGATATACCAATTCAGCAAAGCTATCTGTGGTATGGTTCTAGTGAGGGTGATATTTCTGATTCTCAGGCTTCTGGTGCG TATATCTTTCGGCCAAATGAATCCCCTCCGACCGTTGTTCCAAGATCAGTTCCTTACGAGGTAATCCGTGGACCGCTAGTTGATGAGATTCGTCAGAAGT TTAGCTCTTGGATTTACCAGGTGACTAGGCTGTACAAAGACAAAGATCATGCTGAAATTGAGTTCACTATCGGTCCAATTCCTATTGATGATGGAGTTGG AAAAGAGGTGATCACACGATTGGCGACGAATATGGTTACAAACAAGGAGTTTTATACTGATTCTAATGGAAGAGATTTTCTGAAACGGGTAACTCATACA ATTTATCTTCTTTTTAGTGAAATCATCCACGAAAAATGCGACATTGACTTTTGCAACAAATAAAAATGTTTATGCAGGTTCGAGATCATAGGGAAGATTG GCCGCTGCATGTTACTCAACCGGTAGCAGGAAACTATTATCCACTTAATCTTGGAATTTATACAAAGGATAAGAATTCTGAACTCTCAGTTTTAGTTGAT CGTGCCACTGGCGGAGCCAGCATCAAAGATGGTGAGCTAGAACTTATGCTTCACAGGCGTATTCTCAATGATGATGGTAGAGGAGTCGGGGAAGAACTCG ACGAGCAAGTTTGCTTGAACAGCTTTACATGTGAAGGACTAACAGTA
• Tissue: pods
• Gene name: LI_gene_189895;
• Additional information: details;

Expression of Ll_transcript_474658

FPKM

• PAB: 0.2
• PNAB: 0.6
• PS1: 0.7
• PS2: 0.7
• PS3: 1.4
• PW1: 0.6
• PW2: 0.5
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_474658

• Blastp: Alpha-mannosidase from Canavalia with 78.79% of identity
• Blastx: Alpha-mannosidase from Canavalia with 67.09% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_003629280.1)
• Pfam: Glycosyl hydrolases family 38 C-terminal domain (PF07748.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;