Ll_transcript_474583

Id TrinityTRINITY_DN52082_c0_g2_i12
Name TranscriptLl_transcript_474583
SequenceGCATTATCTGCAGGATATGGACCGCAGTTGAAGAAAGGAAGTCTTACATGGTCGTCTGCAAATGATAAAGATGAGGTTTTGATTTCTTTATTTTGCTTTA TTATTTTCAGCTTCAGCTATAAAGATTGTGTTACACGAAAACCTCCATATTTTAGTAATTTTAAGAAAATGAAATACAATTAAGATATAATTTCAGATTG CTGATTTCTTGCTAGATATTAAGTTCAATTGAACCTTTGAATGCCTTCTGTCACTGTTGAATGTTTTGCTGAATTTTTTTGTTTTGCATGCATTTTAATC AATGGTCGAATAGTTTTCTTAATTTCTTTTTGCTATTCTTTGGTTGGGAGTAGCAGTAGAATTTACAATAATTCCTTAGTCTAAGTGCGAGGATGGCTAT TTTGGCCACCCTTTGGTGGTGCTCTGCACATGGGCTTTTTAGTGGTGTTTCTTTGGTAGACACGGGATTGACATGCTTTGTTGCATAACCCTTTTGATTA GTTTTAGGTGTTTCTTTTTGTTTTCAAAGACAGTTTATCTTAATTTCATTGTATTTATTGAGTGGATCAAAATGTAAATCTAGTCGCAGGGCAAAAATAT TGAAGATATCATTTCCACACTTCGTAATGGTTCAGCAGCAGAAAATGCAGTAGCAAAAATGCGGCATAGAGGTCTTTTAGCACCTCGAAAATCTAGGCAT CGGCTAACTCCTGGAACAGTCAAGTTTGCTGCATTTCATGTTCTCTCACTTGAGGGTAGTAAGGGACTTAATGTGCTGGAGCTTGCAGAAAAAATCCAGA AATCTGGTCTTCGAGACCTGACGACTAGCAAGACACCTGAGGCATCAATTTCTGTTGCCTTGACAAGAGATACTAAGCTTTTTGAAAGAGTAGCTCCATC AACATATCGCGTGCGTTCTGCTTTTAGAAAGGATCCTGTTCATGCTGAGTCCATTCTTTCAGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTT GTCGTTGGTGAAGGTGCTGATGATGTTGAAAGAGAAGAAGATTCAGAAAGCGATGAAGTTGATGAGGACCCTGAAGTTGATGATTTGGTAAATCCTGCAA GCACTAAAAGCACAACTGAACAGAGTGTTGATTTCTCATCAAATGGAAATGAAAATTTGGACCACAATGTAGAACTTATTCAAGATGAGTTTCATAAGGA CCTGCCTTGTTTTCCAGAGAGTTTTTCCAGGAATGCTGATTGTCCAGTTGTTGTTGTGGGACAACCTGCTGCTTCCGAGGATCCGAATGCTGGAAATGTT GAAGAGAATACGGAAATTGATGAAAGTAAGTGTGGAGAGTCATGGGTTCAAGGTCTCTCAGAAGGTGAATATTCTGATCTCTGTGTCGAGGAGCGTCTAA ATGCTCTTGTTGTATTGGTTGGTATGGCAAATGAAGGAAATTCAATCCGTGTTGTTCTTGAGGATCGTTTGGAAGCAGCAAATGCTTTGAAGAAGCAAAT GTGGGCAGAAGCTCAGATAGATAAAGTTCGCCCGAAAGATGATTATCTTAGTAAATCAAATTTTCCATCAATCAGTGGGAATACAGTTGAAACTCAATTA ACATGTCCTGCTGTGGAGGGCAACCAAAGCCCATTGCTTGACATTAATATTGACAATAATAATAATGAGGCATTGTCCTTCACTCCAGAAAATCAAAAGG TGACTACTGCTGCACAGAGCTTGTCTTTTCAGCCCTGGTTAATTCAAGATCCTTGCACAAGTCAAGATAACCCTCAGGCTCAGCTATCTTTGCAATATTC GAAAAGGTCACGTTCTCAATTGAAATCTTATATTTCCCACATAGCAGAAGAGATGTATGTCTATAGGTCCTTACCTCTGGGCCAAGATCGCAGACGTAAT CGGTATTGGCAGTTTGTTGCATGTGCTTCTTGCAATGATCCTGGTGCTGGCAGGATCTTTGTTGAATATCTTAATGGCAAATGGAGGCTTATTGATTCTG AAGAGGCCTTTGATGCTCTTTTGAATTCATTGGATTCACGTGGGATCAGGGAGTCTCATTTGCGCATAATGTTGCAAAAGATTGAGAACTCCTTCAAAGA AAGTGTTCGAAAGAATACACATGTTAAAGTTGGAAGCATGTGTGAAACTAGTATTAAAAATGAAGCTGATGAAACAGATTCAAGTCCTGATCGTGATACT GGGTTTGACAGTCCTAGCAGTATTATTTGTGGCTTGAACACTGATACTTCAGTAACTTCTTTGTCCTTCAAAATTGAGCTTGGGAAAAGTGAGAGCGAGA AGAAAGCTGCCTTGAGAAGGTATCAAGATTTCCAAAAATGGATGTGGAGAGAATGCTATAACTCATCAATATTGAGTGTAATGAAAAGTGGTAAACAGAG ATGCAAACCTCAGGTGGGCATCTGTGATACCTGTCTCAACCCTTATTTCTTTGAAGATTCCCATTGCAATTGTTGCCACCAACCTATTCCCTCACATAAT GGATTTAATTTTGCTAAGCATTCATTTCAATGTGGAGACCAGTTGTCCAAAGATATTTGTATTTTGGATTCTTCTCTTCCCTTGCAGACAAGATTGCTGA AGGCCCTGCTGGCTAATATTGAGGCATGTGTTCCGCCTGAGGCACTTAATTCACTTTGGACAGAAGATATTAGGAGGCGTTGGGGTTTGAAGTTGAGCAA ATCAAATTCTGTTGAGGAACTTTTACAGATATTGACCCTATTTGAGAGAGCATTACAGCGAAATTTTCTATCTTCAAACTTCTCTACGACAGAAGAATTG TTAGTATCAAGCGGCTTGTCTCAGAGTGCCGGAGATGCTTCTGCTGATCCCGAATCGGTTGCTTTACTTCCATGGGTTCCACAGACCACTCCAGCCATGT GTCTCAGACTTTTTGAGTTTGATGCATCCATTAGCTACATACCGGTTGAGAAGCCCGAGTCTTTTCCGGAAAAGGAGGCTACAGAATACACAAAGCTTCC TTCAAGATATAGTCCTTTCAAATCTAGTGGAGTGGTTGAACCATCAGATTTGGATCATGATGAATTCATGAAAGTTAAATCTGCTCATATGAAAATTGTA CCAAGCGGCAATAAGCGTAGACGAGGGACTCATGACAAAGGACTGGGTAAAAATCTATCTAAAGGAATGCATCATTCAAAACAAGATATTGGCCGACATA CTGTTAAAGTTACCGATAGTCTAAGTCAGAGATTAAAACAGCAGGGACGAGGGTCACAAGGAAAAGGCGGTGGACGTGGCCGCCGAACAGTCAGGAAAAG GAGAGTGGAAAAGAGGGCAGTTGAAGATTTTTTGTTGAGTCCTAGGGATACTAGCTATCAGAGCTCCAAGATTGGTAGAGAACCATTGAGAAACATGTAT GAGGAATGGGTTGATGATGATGAAAAGGGAAGTCCCATGAGTCCCACCCACATTGGGCCTTCTGCTGATGTTAGTAACAGCACTGATGATGTTGAATCTG ATGACAATGTTGAAGCAGTGGAATATGATCAAGGAAACTGGGAGATAGGTTTCAATGGTAACCCAAGCAGATGGAGCAGAGATTTGGTTGGAATGAGTGA TGAAGATATGGAAGCTTCTGAAGATGACAATAATATTATTGAAGGGGATGATAATGATGATGATTCAGAGGCAGATATTATGAGTGGGGATTCAGATGGT GTGGCTAATGGAGTTGTAAATGTACAAGGTTCAGATTCCTCTGACTCTGAACAATCTTCTGATTAGAATATTTTTTTAATTGATCAACTAAAGGATTTTG CATGGCTTCAATGCCTTGAGTAGAAGTATATATATTATCCCATGCAGAATGGAGCCTTTTATAAAAGGGTCATTTTGCTTTTTACTCTCTTCTATAATAG TAGATATATTCATTGATTAATAAAGTCTTGTATAGTTATTTGAAATATGGTTTTGCTACCTTAAAAAATTCATAAATTTATAGTTCGTTCTGGGTTGTGA AGTATTTTAATCAAGAGAAATTAATTTATTTTTCTAGAAAAAAA BLAST
Tissuepods
Gene nameLI_gene_189906; 
Additional informationdetails; 

Expression of Ll_transcript_474583

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_474583
BlastpHomeobox-DDT domain protein RLT1 from Arabidopsis with 43.45% of identity
BlastxHomeobox-DDT domain protein RLT1 from Arabidopsis with 46.19% of identity
EggnogDDT domain(ENOG4111F53)
KeggLink to kegg annotations (AT1G28420)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019423521.1)
PfamHB1, ASXL, restriction endonuclease HTH domain (PF05066.12)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;