| Id Trinity | TRINITY_DN52082_c0_g2_i13 |
|---|---|
| Name Transcript | Ll_transcript_474584 |
| Sequence | AGCAAGTTCAACAAAACAAGCTAAAAATTAATATCACAATGAAAATTCAACAAACCCGAGAGACAAGAACCTTATGAAAAAAATGTTCATGCTAATTAAA ACAACGCGTGGAGAAAACATGTGCAATCATAAACACAGAGTCAGCAAGTGACAGAAACATTTCATTTTACATTACACAAAAACAAATTACTAAGAAAATT AGATTATAATTAGTAAAAAGCAAAAACAAAAACAAATTATTATGAAAGGTGGTGATGGAGTTATAGCAATCAAGAGCAACTGTTGCTGCTGTTGGATTAT TATTATTTATGGTTTTGGATTATTAATATTGTGTTTTTATCTTTGGTTTTTGTTCTTTTATTCTTCTTCATACTTTCATTTCTTCTATTCAATCCAATTT AAAATTTGTTGGCATTGATAATTGAAATGATATTTATTTATTTATTTTCATCCATGATAATATAATTCTGTGCCTTTTCAATTTTCATCCCTTGACTAAC ACGGAATTTTGATTTCAAGAGAGAGAAATTACACAAACAGATAGAAAAATCTAAAAGCAGATAATAAAATAGCATAAACAAAAAAAATTGATTCTTTTTG GTTACCCTAATTTCCAATTTGCTGCTACGTTTCGTTTCCTTTTTGTGCTGCTGTTTCGTTTGTGGGTTTTGGATCTTTAGGGTTCAAAGGGAGAAAGTTT CGATCTTGATCGTGTTCGTCGATGGAGGTCGAAGCAGATAACAATACCCAGAAGAGAGATGAAGAAGATGATAATAGCAATGAGAATAACACTGGAAGTA ACAGCAAAATCGTAAATTCGAACGAGGGTCAGAGCAGGCCCAAGCGTCAAATGAAAACCCCGTTTCAGCTTGAAATGCTAGAGAAAGCTTATGCAATGGA GACTTACCCCTCGGAGGAGACGAGGGCAGTGCTGTCGGAGAAGTTGGGGCTGTCAGATCGGCAGCTGCAGATGTGGTTCTGTCACCGGAGGTTGAAGGAA AAGAAAGACTCACAACAAAAGAAGCCCGGGAAAATGGTGGCGCCGCCTACTTTGCTGGATTCCCCCATAGATGACATAAAATTGGGTCATGAACCTGGTA ATGAATATGGATCAGTGTCAGGTTCTGGCTCCAGTCCTTTTACCAGCCTAGAGTTGAGGAATGTGGTGCCCCGGGGAGTGCCCGGGTACTATGAGTCACC CCAGACTATAATGGAGCTTAGAGCAATTGCCTGTGTGGAGGCACAATTAGGGGAGCCGTTGAGGGAGGATGGACCTAGTCTCGGATTAGAGTTTGATCCA TTGCCACCAGATGCTTTTGGGGCACCGATAGCGGTTACAGAGCAACAGAAGCGGCCTAGTCTTGTCTATGACAATAAAGTATATGAAAGACATGATGTTA GAACAAATAAGGCTATCGTAAGGACATTCCCTGAATATCCACTGTTTCTTCCAAACCAGCCTGACATTAGGGTTGATGCTTTTGGTCAATTGGCCCCACC CCATTTACATGATCCAAGGGAAGGTCCTACCAGAACACCTCCTTTTCCCCTTGGAAATGAGCAAATACCCAGAAATCAAGCTACCCAAAGTCATTATTCT CGTGTTGGCCAACCTGATAAGCATGGGATTCCCTATTCATCTCCTCCTCTAGACAATGATGTTGCCTCCCAAAGAGAGTTTTACACACGCATAGCCGAGG CTGGAACAACTTCCCACTTGTCTGATCACCCAGTTGTTGGGCAAGATAGTTCTTATGCTTTACCTGGTGGACAAGTTTCCCATAACGACGCTGTGTTGCA AATGGAGAATAAGAAGAGTGATGATACCAGAGTTGCAAGGGAAGTTGACGCCTACGAGACGAGGATCAGAAAAGAGCTTGAGAAACAAGATAATCTGAGA CGAAAGAATGAAGAGCGATTGAGGAAAGAATTGGAAAGACAAGATCGTGAAAGAAAGAAGGAAGAAGAGAGGTTGATGCGTGAGAGACAGCGAGAAGAGG AAAGATCAAAGCGCGAGCAAATACGGGAAATAGAAAGGAGGAAAAAGTTTATGCTGAAAGAAAATTTAAAAGCAGAGAAGAGGAGACAAAAGGAAGAGCT TCGCAGAGAGAGAGAGGCAGAAAGAAGAAAGGCTGCCCTTGAAAAGGCAGCTGCTCGTAGAATAGCCAAAGAATCAATGGAGCTTATTGAGGATGAACAA CTGGAACTGATGGAGTTGGCGGCAGCAAGCAAAGGACTATCCTCTATCATAAATCTTGATCTTGATACTTTGCAAAACCTTGAATCATTTAGGGATTCGT TGTGTGTTTTCCCACCTAAGAGTGTTAAGCTGAGAAAGCCATTTGCTATCAATCCCTGGATCAACTCAGAACAGAATGTTGGCAACCTTCTCATGGTTTG GAGATTCTTGATTAGTTTTGCTGATGTTCTTGAGTTATGGCCTTTTACCCTTGACGAGTTCTTACAAGCATTTCATGACTATGATTCAAGATTGTTGGGT GAGATACATGTTGCTCTTCTTAAGGTGATAATAAAAGACGTTGAGGATGTTGCTAGGACACCTTCTACAGGATTAGGAGTGAACCAGAATGGAGCTGCTA ATCCTGGAGGTGGCCATCCAGAGATTGTGGAAGGAGCATATTCATGGGGCTTTGACATACGAAATTGGCAGAAGAACTTAAATCAATTGACATGGCCAGA AATTTTCCGACAGTTAGCATTGTCTGCCGGGTTTGGACCTCGGTTGAAGAAAAGAAATATTTCGTGGTCTTATGCACATGATAAAAATGAGGGAAGAAGT GGTGAAGATATCATCTCTACACTTCGTAATGGTTCAGCCGCTCAAACTGCAGTGGCAAAAATGCACGAGAAAGGTCTGCTAGGTCCTCGAAGATCAAGGC ACCGGTTAACTCCTGGAACAGTTAAATTTGCAGCATTTCATGTTCTCTCTCTGGAGGGTAGCAAGGGTTTGACAGTATTAGATCTTGCTGAAAAAATTCA GAAATCTGGTCTCCGGGACCTGACGACCAGCAAGACACCTGAAGCATCAATTTCCGTGGCTTTAACAAGAGATACTAAACTTTTTGAAAGAATAGCTCCG TCAACATATCGTGTACGTTCTGCATTTAGAAAGGATCCTGCTGATGCTGAATCTATTCTTTCGGAAGCAAGAAAGAAAATACAAATATTTGAGAATGGGT TTCTAGCTGGTGAAGATGTGGATGATGTTGAAAGAGAAGATTCAGAAAGTGATGAAGTTGATGAGGATCCTGAGGTCGATGATTTTGTAAATCCTTCAAG TGTTATCCAAAATTATGAACTGTATGGCGACACAAACATTTGCTCATCAGATGTAAAAGAAAGTTTGGCTCATGATGTTGGACTCATTAAGAATGAGTAT GATAGTGATCTGCGTTGTTTTCCTGAGAATGGCTCCAAGGATTCTGATTGTCCCACTTCTGTTTCAAAACAACCTCTTGCTTGTGTAGATTTGAATACAC AAAATCTTGATCAAGATGATATTGAAATTGATGAAAGCAAGTCCGGAGAGTCTTGGGTTCAAGGTCTTACTGAAGGAGAATACTCTGATCTCAGTGTAGA GGAGCGTCTAAATGCTCTTGTTGCATTGGTTGGTGTAGCAAATGAAGGGAATTCAATCCGTGTTGTTCTTGAGGATCGATTGGAAGCAGCAAATGCTCTG AAGAAGCAAATGTGGGCTGAAGCCCAGATAGATAAAATTCGTCTAAAAGATGATATTTTCAATAAATCAGATTTTCCATCACTTGTTGGGAATCAAGTTG AAATACAACATACATATCCTGCTATAGAGGGTAACCAAAGCCCATTGCTTGACATTAATATTAGCAATATTAAAAATGAAGCATCGCCCAGCACTGCACA AAACCAAAAGGTAACTCCAGTTACACACAGGCTACCTGTGGAAAGGTCCTCATCAGTTCAAGATTTATGCCCAGGGACAGGTCCAGACAACCCTCAAACT CAGGTACCTGCACCATATTCGAAAAGGTCACGTTCACAATTGAAATCTTATATTGCCCAGATGGCAGAGGAGATGTATATCTACAGGTCTTTACCCCTTG GCCAAGATCGCAGACGTAATAGATATTGGGTGTTTGTTGCATCTGTTTCTAGCAATGATCCTGGTTCTGGCAGGATCTTTGTTGAATGTCATGATGATGG CAAGTGGAGGCTTATTGATACCGAAGAGGCCTTTGATGTTCTTTTGACATCACTGGATTCACGCGGGATCAGAGAATCACATTTGCGTTTAATGCTGAAA AAGATTGAGAGTTCTTTTAAAGAAAATGTCCGAAAGAATACACAATGTGCCAAAATTGAGTGTCCTAGCTTGAACTCTGAAACATCAGAAATTTCACCAT CCTTCAACATTGACCTTGGGAAAAGTGAGAGCGAAAGGAAAGCTGCCTTTAGGAGGTATCAAGATTTTCAAAAGTGGATGTGGAAAGAATGCTATTATTC ATCAATACTATGTGCGATGAAAGCTGGGATAAAGAGATGCAAACCTCAGGTGGACATTTGTGATACTTGTTTCAACCCTTATTTTGTTGAAGACTCCCAT TGCAATTCCTGCCGCCGGTCTTTCCCCGCAAATAATGGATTTAATTATTCTGAACATGCATTTCAAGGTGAAGACAAGTTATCCAAAGATGTTTGTATTT CAGAATCTTCCCTTCCTTTGCGGGCAAGATTGCTTAAGTATCTGTTGGCTTGTATTGAGGTATCTGTTCTGCCTGAAGCATTTGGAACAATTTGGACAGA TGATATTAGGAAGCGTTGGGGCATAAAGTTGAGCAAATCATCTTCTGTTGAGGAACTTTTAAAGTTACTGACCCTATTCGAGAGAGCATTACAACGAGAT TTCTTATCATCGAACTTCTCTACAACAGAGGAGTTGTTGGGATCAAGCAGCCTGTCCCAGAGTGCTGCACATGCTTCAGATCCTGAACCAGTTGCTTTAC TTCCATGGATTCCACTGACCACTCCAGCTGTGTGTCTCAGACTTTTTGAGTTTGATGCATCTGTTAGCTACATGCATGTTGATAAACCCGACTCTTGTCA GGAAAAGGAAGCTAGAGAATACATAAAACTTCCTTCAAGATATAGTCCTTTTAAATCTAGTAGAGTCGCTGAGCCATCAGATTTGGACCATGATGAATTC ATGAAAGTTAAATCTGCTCCTATGAAAATCGTACAAAGCGGCAATAAACGTCGACGAGTGACTGATGGCAAAGGACGGCGTAGAAAACTATCTAAAGGAA TGCATGGTTCAAAACAAGACACTGGCCGCCATATTGTTAAAGTGACCGAGAATCCAAGTCAAAGATTAAAACAGCAGGGACTAGCATCACAAGTAAAAGG TGGTGGAAGTGGCCAACGGACAGTCAGGAAAAGGAGAGTGGATAAGAGAGCTGTTGAAGATTTGTTGTCGAGCCATAGGGCTAGTACCTCTCACAGCTCA AAGATTGGTGGTATGGAACCGTCAAGAAACATGGAAGAGGAATTTTTTGATGATGAAAAGACGAGTCCAATGACTCCCATCCACATTGGTGCTGCTGATG TTAGTAACAGCACTGAAGAGGTTGAATCTGATGACAATGGCCAAGCGGTGGAATATGATAAAGGAAACTGGGAGATAAGTTTTAATGATACCCCCAATGG ATGGAGCAGGGATTTGGTTGGAATGAATGATGAAGAAGATATAGAAGCTTCTGAAGATGACAATGACAAAAGTATCAGTAAAGAGAATGAATTGATGGAG GATTCAGAGGCAGAAGATGTTATGAGTGAAGAGGATTCAGATTGTGTGCCTAATGGAGTTGTAAATGAAGAAGGTTCATACTCCTCTGACTCTGAAGATT CTTCTGATTAGGACATTGTTTCTTAATTGATTAACAAAAAGGATTGCATGTTATGGCTGCGTTACATTTTTTATGTTTCAGATTTACTAAGGCATGTCAT GGCTCTAATGATTTTTCTTGTATCAAAGCATTTTCAGAAGTAGTATATATTATCAATGCTAACCAATTGCCCTTCAAAAATTCAATAAAGTAGTTTGTTT TAGGTTCTGATGTATTTAACGCTGAGATATTACTTCATTTTTCTAGTACAAGTTTTGTTATTTTTATGTTCTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_189906; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_474584
| Blastp | Homeobox-DDT domain protein RLT1 from Arabidopsis with 47.93% of identity |
|---|---|
| Blastx | Homeobox-DDT domain protein RLT1 from Arabidopsis with 48.38% of identity |
| Eggnog | DDT domain(ENOG4111F53) |
| Kegg | Link to kegg annotations (AT1G28420) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440228.1) |
| Pfam | Homeobox domain (PF00046.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |