Ll_transcript_474571

• Id Trinity: TRINITY_DN52082_c0_g2_i4
• Name Transcript: Ll_transcript_474571
• Sequence: ATTTTAGTCTAGTTCCGTTTTCTTTTGAACCCATAGGCTAGTCCCTGTATTGATCAACTCAATTCCAGCTTCATTGATATCAAACACATTTTCCTGTGCT TTGGTTGTGATTTCCATCAATATCTAATAACTTAGCAAATACCATTAATAATGATAACCTTTGAAATATGAATACTCACACCATCCTATTATTCACAGTA ATTATCTTTTTTATGCTTTTGGTGAGATTTATGCCCCAACTATATGCTTTGCCTTGTATGTGATATAATTTATATTTTATTCAACCAATTCTCTACAGGC CTTTGATGCTCTTTTGAATTCATTGGATTCACGTGGGATCAGGGAGTCTCATTTGCGCATAATGTTGCAAAAGATTGAGAACTCCTTCAAAGAAAGTGTT CGAAAGAATACACATGTTAAAGTTGGAAGCATGTGTGAAACTAGTATTAAAAATGAAGCTGATGAAACAGATTCAAGTCCTGATCGTGATACTGGGTTTG ACAGTCCTAGCAGTATTATTTGTGGCTTGAACACTGATACTTCAGTAACTTCTTTGTCCTTCAAAATTGAGCTTGGGAAAAGTGAGAGCGAGAAGAAAGC TGCCTTGAGAAGGTATCAAGATTTCCAAAAATGGATGTGGAGAGAATGCTATAACTCATCAATATTGAGTGTAATGAAAAGTGGTAAACAGAGATGCAAA CCTCAGGTGGGCATCTGTGATACCTGTCTCAACCCTTATTTCTTTGAAGATTCCCATTGCAATTGTTGCCACCAACCTATTCCCTCACATAATGGATTTA ATTTTGCTAAGCATTCATTTCAATGTGGAGACCAGTTGTCCAAAGATATTTGTATTTTGGATTCTTCTCTTCCCTTGCAGACAAGATTGCTGAAGGCCCT GCTGGCTAATATTGAGGCATGTGTTCCGCCTGAGGCACTTAATTCACTTTGGACAGAAGATATTAGGAGGCGTTGGGGTTTGAAGTTGAGCAAATCAAAT TCTGTTGAGGAACTTTTACAGATATTGACCCTATTTGAGAGAGCATTACAGCGAAATTTTCTATCTTCAAACTTCTCTACGACAGAAGAATTGTTAGTAT CAAGCGGCTTGTCTCAGAGTGCCGGAGATGCTTCTGCTGATCCCGAATCGGTTGCTTTACTTCCATGGGTTCCACAGACCACTCCAGCCATGTGTCTCAG ACTTTTTGAGTTTGATGCATCCATTAGCTACATACCGGTTGAGAAGCCCGAGTCTTTTCCGGAAAAGGAGGCTACAGAATACACAAAGCTTCCTTCAAGA TATAGTCCTTTCAAATCTAGTGGAGTGGTTGAACCATCAGATTTGGATCATGATGAATTCATGAAAGTTAAATCTGCTCATATGAAAATTGTACCAAGCG GCAATAAGCGTAGACGAGGGACTCATGACAAAGGACTGGGTAAAAATCTATCTAAAGGAATGCATCATTCAAAACAAGATATTGGCCGACATACTGTTAA AGTTACCGATAGTCTAAGTCAGAGATTAAAACAGCAGGGACGAGGGTCACAAGGAAAAGGCGGTGGACGTGGCCGCCGAACAGTCAGGAAAAGGAGAGTG GAAAAGAGGGCAGTTGAAGATTTTTTGTTGAGTCCTAGGGATACTAGCTATCAGAGCTCCAAGATTGGTAGAGAACCATTGAGAAACATGTATGAGGAAT GGGTTGATGATGATGAAAAGGGAAGTCCCATGAGTCCCACCCACATTGGGCCTTCTGCTGATGTTAGTAACAGCACTGATGATGTTGAATCTGATGACAA TGTTGAAGCAGTGGAATATGATCAAGGAAACTGGGAGATAGGTTTCAATGGTAACCCAAGCAGATGGAGCAGAGATTTGGTTGGAATGAGTGATGAAGAT ATGGAAGCTTCTGAAGATGACAATAATATTATTGAAGGGGATGATAATGATGATGATTCAGAGGCAGATATTATGAGTGGGGATTCAGATGGTGTGGCTA ATGGAGTTGTAAATGTACAAGGTTCAGATTCCTCTGACTCTGAACAATCTTCTGATTAGAATATTTTTTTAATTGATCAACTAAAGGATTTTGCATGGCT TCAATGCCTTGAGTAGAAGTATATATATTATCCCATGCAGAATGGAGCCTTTTATAAAAGGGTCATTTTGCTTTTTACTCTCTTCTATAATAGTAGATAT ATTCATTGATTAATAAAGTCTTGTATAGTTATTTGAAATATGGTTTTGCTACCTTAAAAAATTCATAAATTTATAGTTCGTTCTGGGTTGTGAAGTATTT TAATCAAGAGAAATTAATTTATTTTTCTAGAAAAAAA
• Tissue: pods
• Gene name: LI_gene_189906;
• Additional information: details;

Expression of Ll_transcript_474571

FPKM

• PAB: 4.5
• PNAB: 8.9
• PS1: 11.4
• PS2: 11
• PS3: 15.3
• PW1: 8.7
• PW2: 9.2
• PW3: 8.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_474571

• Blastp: Homeobox-DDT domain protein RLT1 from Arabidopsis with 33.21% of identity
• Blastx: Homeobox-DDT domain protein RLT1 from Arabidopsis with 38.9% of identity
• Eggnog: DDT domain(ENOG4111F53)
• Kegg: Link to kegg annotations (AT1G28420)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423521.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;