| Id Trinity | TRINITY_DN52086_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_473063 |
| Sequence | TGATGCGGTATGTATGATGATTTTCTGTAAAATAATCATCGACAGTAGTTGGAAGTTCTCCGCTGATGGTCACTCCATTCGACGGAGATTTATACGTGCC CAATATTTATTTCTTTCTAATTTTGAGATGTGTGTGTGAAATAAAGTAATTGGTTTAAGAATTCTGCTTTATGCGAACTTATATGTTCATGAACTCTTCG TTGTTAAAAAAAATCCAAATTCACCAAAAGAATAAAAAACCTCAACCTCAACCTCAACTTTGTCAAAAGGATGGAAATTGGTGCACTTTACCTTCTTTTA AATGTTGTTTTTTAATAGTTGATTTATGTACACATTGAACTTTAATTTTTGCTGGTCTCACTTCATGCCCATTGATCTTTTTTTGAATTGAATGCTTCCA GATTCATTCCCTATTGAAGGACCTGGTCCGCAAAGCTGTTAGCGAGACTCTGGTATGTTCTTGGCAGTGCTTATTTAATATTTCTGTTGTATTTCTTTTA ACTATATTTGTGGTTAGTAAGTTTCCCAGTTGCTGCTCCGATTTTGTCTTGTTTATTCTAGTGAGTAGTGACAAGATACATTTTGCAATATTAATGACTC TCTCACATGTTTCTTAGACCTATTATATAACTATTGATGAAAAGACTTTGGCTTTGAAAGCAAACATGAGTATATGATCGATCAATGGTTATAAAGTAAA ATGTTAGAGAAAAAGGCTGAGATGATTCTTTTCCATTTTGAAGTGGCTTTGAATTTAAGTTGAAACATGTTGGTTCAGGGTTCCCTTCGGGTAAAACAAT TAAGACGAGGTTTTGCTTTTGGCTAGAATTTTGATTAGTCACTTAGGCATTTGGGAGTGCCAATAGCATTCTCCTATGATATGTATGCTTAGATGATCTA ATACATCAATCTCTTATGCGGAAATTACACTAACCTCCCTACTTGAGGTTTGGCTTCATTAGACCTGAGGTAGGTTTCTGGTGTGATCAAAATTACACTA ATCTCTAATGTATCTTGTCACACCTGAAGGGCATAACTTTGTATTTGTGAAAATAAAAAGTCGCTGAAATTAGAAGTGAATAAGGCTATTGAATTCACCT TGTGAAATCTAGAATCCTTCTTATGAAAGATAATAAAGAGGTAGGTGTCTGGTGTAACATAGTCACACCTGTGAACGGAAGTTGACCATTAATCCTTTGT ATTTGTGCACGTAAAAAATCGCTGAAACTAGAGATTATAAAGGCTATTGATTCACCTTGTGAAATCTAGAATCCTTTTTATGAAAGGTTAATAAAAAAAG CTCAACCTGGAAAAGCACTACAAAGTATGTTATCTGATTTTTTTAAAAAAACTAATTTGACACATGGTCCTAGTAGTTCTTCTATTACAAGGAACCTGCC GTCCCGAATTTGAAGGATTTTATATGGGTGTTGTGTATGCTAATGTATCTATTTTGGATTTTGCACTCTGATGGATATTAAATTGTCTTATGTGGGGCCA ATGACCGTTGTCATGTAAATGCTTTCACTTCTTGTTGCATCTGCAGAAATGGTTGATGATCCCACATTTGTAATTATTTATGATTGAACTGGATCAGTTT GAAATTTTATCGCATTTTAGTTTTCATATACTTAGAGCTGTAATATTTTCTTCCTTCCCTTCACAAATTTCCCAGCTAAAAATACTTCGTTGGTTTGTCT GACCCAGGAGCTGAAGCAATATCCTGGTCTGCGGGTTGAAGTTAGTGCAGCAGCTATTGAATCACTAGAGAGAATGAGGGAGGAAAGCAGAAAATCAACA CTACTCCTAGTTGATATGGAGTGTGGCTACCTCACGGTTGATTTTTTTCGGAAGCTTCCTCAAGAAGTTGACAAGGGTGGCAATCCCACACATTCTATTT TCGATAGATATAATGATTCATATCTGAGGCGAATCGGAACTACGATTTTGTCCTATGTCAATATGGTCTGTGCAACTCTGCGGCATGCTATTCCCAAGTC CATAGTCTATTGTCAAGTGCGGGAAGCAAAACGAAGCCTACTTGATCACTTTTTCACTGATCTAGGCAAAATGGATGTAGGGATAAATTTGTTCTTCCAA GTTTTATGATATATGTTTTCATTTATTTTCTGAACTTAAAAAATGCAATTATTGAGTTGGTTTTCATATGGACTTGATATTTGCCAAAGAAATTAAACAA TGACACCTGCATAAATTCTTTGCAGCCAAAGCGGTTATCAGCATTGCTGAATGAGGATCCTGAAGTTATGGAACGTCGTAGTGCCCTCGCAAAGAGACTT GAATTATACCGGAGTGCACAAGATGAAATAGATGCAGTTGCTTGGTCCAAGTAGATGTGCATACGTCCATTACTTTTACACCAGAAGCAGCTGTGTTATT ACTATTCCACGCTCATTCTTTATGCTCCTTTCTTGTATTGTCATTCTAAATATCCAATATTTGTTTCAAATAACTTGAGAACATAGCATTTTAATATAAT TTTTTGTATCTCTGTTTTAAGTTTATTATTCTCGTGAGAGCTTCACCAGGAAAAAAATTCAAAATTTACCCAAATTTTAGTTTTCTCATAGGTACAGCCT ACTGGAATGGTTTTGATTGATAAAAAGAAATTCTACCTTAATCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_189929; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_473063
| Blastp | Dynamin-related protein 12A from Soja with 89.22% of identity |
|---|---|
| Blastx | Dynamin-related protein 5A from Soja with 85.94% of identity |
| Eggnog | Dynamin family(COG0699) |
| Kegg | Link to kegg annotations (547855) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421954.1) |
| Pfam | Dynamin GTPase effector domain (PF02212.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |