Ll_transcript_473074

• Id Trinity: TRINITY_DN52086_c0_g1_i8
• Name Transcript: Ll_transcript_473074
• Sequence: TGATGCGGTATGTATGATGATTTTCTGTAAAATAATCATCGACAGTAGTTGGAAGTTCTCCGCTGATGGTCACTCCATTCGACGGAGATTTATACGTGCC CAATATTTATTTCTTTCTAATTTTGAGATGTGTGTGTGAAATAAAGTAATTGGTTTAAGAATTCTGCTTTATGCGAACTTATATGTTCATGAACTCTTCG TTGTTAAAAAAAATCCAAATTCACCAAAAGAATAAAAAACCTCAACCTCAACCTCAACTTTGTCAAAAGGATGGAAATTGGTGCACTTTACCTTCTTTTA AATGTTGTTTTTTAATAGTTGATTTATGTACACATTGAACTTTAATTTTTGCTGGTCTCACTTCATGCCCATTGATCTTTTTTTGAATTGAATGCTTCCA GATTCATTCCCTATTGAAGGACCTGGTCCGCAAAGCTGTTAGCGAGACTCTGGTATGTTCTTGGCAGTGCTTATTTAATATTTCTGTTGTATTTCTTTTA ACTATATTTGTGGTTAGTAAGTTTCCCAGTTGCTGCTCCGATTTTGTCTTGTTTATTCTAGTGAGTAGTGACAAGATACATTTTGCAATATTAATGACTC TCTCACATGTTTCTTAGACCTATTATATAACTATTGATGAAAAGACTTTGGCTTTGAAAGCAAACATGAGTATATGATCGATCAATGGTTATAAAGTAAA ATGTTAGAGAAAAAGGCTGAGATGATTCTTTTCCATTTTGAAGTGGCTTTGAATTTAAGTTGAAACATGTTGGTTCAGGGTTCCCTTCGGGTAAAACAAT TAAGACGAGGTTTTGCTTTTGGCTAGAATTTTGATTAGTCACTTAGGCATTTGGGAGTGCCAATAGCATTCTCCTATGATATGTATGCTTAGATGATCTA ATACATCAATCTCTTATGCGGAAATTACACTAACCTCCCTACTTGAGGTTTGGCTTCATTAGACCTGAGGTAGGTTTCTGGTGTGATCAAAATTACACTA ATCTCTAATGTATCTTGTCACACCTGAAGGGCATAACTTTGTATTTGTGAAAATAAAAAGTCGCTGAAATTAGAAGTGAATAAGGCTATTGAATTCACCT TGTGAAATCTAGAATCCTTCTTATGAAAGATAATAAAGAGGTAGGTGTCTGGTGTAACATAGTCACACCTGTGAACGGAAGTTGACCATTAATCCTTTGT ATTTGTGCACGTAAAAAATCGCTGAAACTAGAGATTATAAAGGCTATTGATTCACCTTGTGAAATCTAGAATCCTTTTTATGAAAGGTTAATAAAAAAAG CTCAACCTGGAAAAGCACTACAAAGTATGTTATCTGATTTTTTTAAAAAAACTAATTTGACACATGGTCCTAGTAGTTCTTCTATTACAAGGAACCTGCC GTCCCGAATTTGAAGGATTTTATATGGGTGTTGTGTATGCTAATGTATCTATTTTGGATTTTGCACTCTGATGGATATTAAATTGTCTTATGTGGGGCCA ATGACCGTTGTCATGTAAATGCTTTCACTTCTTGTTGCATCTGCAGAAATGGTTGATGATCCCACATTTGTAATTATTTATGATTGAACTGGATCAGTTT GAAATTTTATCGCATTTTAGTTTTCATATACTTAGAGCTGTAATATTTTCTTCCTTCCCTTCACAAATTTCCCAGCTAAAAATACTTCGTTGGTTTGTCT GACCCAGGAGCTGAAGCAATATCCTGGTCTGCGGGTTGAAGTTAGTGCAGCAGCTATTGAATCACTAGAGAGAATGAGGGAGGAAAGCAGAAAATCAACA CTACTCCTAGTTGATATGGAGTGTGGCTACCTCACGGTTGATTTTTTTCGGAAGCTTCCTCAAGAAGTTGACAAGGGTGGCAATCCCACACATTCTATTT TCGATAGATATAATGATTCATATCTGAGGCGAATCGGAACTACGATTTTGTCCTATGTCAATATGGTCTGTGCAACTCTGCGGCATGCTATTCCCAAGTC CATAGTCTATTGTCAAGTGCGGGAAGCAAAACGAAGCCTACTTGATCACTTTTTCACTGATCTAGGCAAAATGGATCCAAAGCGGTTATCAGCATTGCTG AATGAGGATCCTGAAGTTATGGAACGTCGTAGTGCCCTCGCAAAGAGACTTGAATTATACCGGAGTGCACAAGATGAAATAGATGCAGTTGCTTGGTCCA AGTAGATGTGCATACGTCCATTACTTTTACACCAGAAGCAGCTGTGTTATTACTATTCCACGCTCATTCTTTATGCTCCTTTCTTGTATTGTCATTCTAA ATATCCAATATTTGTTTCAAATAACTTGAGAACATAGCATTTTAATATAATTTTTTGTATCTCTGTTTTAAGTTTATTATTCTCGTGAGAGCTTCACCAG GAAAAAAATTCAAAATTTACCCAAATTTTAGTTTTCTCATAGGTACAGCCTACTGGAATGGTTTTGATTGATAAAAAGAAATTCTACCTTAATCC
• Tissue: pods
• Gene name: LI_gene_189929;
• Additional information: details;

Expression of Ll_transcript_473074

FPKM

• PAB: 0.3
• PNAB: 0
• PS1: 0.2
• PS2: 0.1
• PS3: 0
• PW1: 0
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_473074

• Blastp: Dynamin-related protein 5A from Soja with 89.51% of identity
• Blastx: Dynamin-related protein 5A from Soja with 88.02% of identity
• Eggnog: Dynamin family(COG0699)
• Kegg: Link to kegg annotations (100037461)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421954.1)
• Pfam: Dynamin GTPase effector domain (PF02212.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;