Ll_transcript_474241

• Id Trinity: TRINITY_DN52091_c1_g3_i1
• Name Transcript: Ll_transcript_474241
• Sequence: GTTCTTCCTCTCCTTGTCAACAACACCAACACACACACTTCCTTTTTCTTCTCTCTCTCTCTCTCTCTCTTCTTCTGTGACAACGATAAACGAAGTTTCC TTCCGCAAATTTTTAACCTTTGACTTCTAAGTCTCCTCTGTAATTTCCCTTTGATTCTCTCTCTTTTGCTTTCTGGGTCAATCAAAGTTCCAACCTTTTT CTCATTTCGATAGATCTAATACCAAATCTTTTTACTTTCTTCTACTGGGTCGGGTTCCTCCTTTCTCAAATTCCTCATCAGTTTTGGGTTTAGTTTGATT ATGCTGCTTTGGTGGCTCTGGAAATTCAAACTAATCGCTTCTTAATCTTTTTTGTTGTTGTTGTTGTTGTTGTAGTAGTAATAGTTTTGATGTGTTAAAA TTTGCAGATATATCATTTTTTTCTTGTTCCATAGGGTGATTTAAGATTTATATTGAAAGTTTGACTCTTTCTTAGATTTCATGTATTTGGTTAATATTTT GCAGCCACCACTTGTTAGATAAGTGTTTTTCATTCATAGTTTCTATTTATAAGATGCTTCTGCTTTTTTCCCTTTTTGGTTTTTGCTTCTATTAGTCATT ACAAAAGTTATTGGAACTTAATTTGTGAGGGGACATTAAAGTGTGATGTCTTTGAATATGTTCTACCTTTCTAGGATCAATTAGGTTCTCAAGTGGATTT AATGGCTCATTCAGCTGAACCCTCATCATCTTTAAGCTTTACATCATCTTTATCGAATGGTTCAGTCAACCACAACATGTGTACTTCTTATGGCCCTGAT CCCGGTCTTAACCTTGATGTCGTAAGTTTGAATAAGCTTAGCTCTAATTTGGAGCAGCTTTTGGTTGAATCTGGTTCTGATTATAGTGATGCTGATGTCG TAGTTGAAGGAATTCCGGTCGGTGTTCATCGATGTATCCTGGCCTCTCGGAGTAAGTTTTTCAATGAATTGTTCAAGAAAGAGAAAAATTCATCAGAAAA AGAAGGGAAATTGAAGTATTTCATGAGTGATATGTTGCCTTATGGCAAGGTTGGATATGAAGCCTTCAACATATTTCTAGGCTATGTATATACTGGAAAA CTAAAGCCCTCTCCGACCGAGGTATCTACTTGTGTTGACAATGTGTGTCTTCATGATTCCTGTAGACCTGCAATTAACTTTGCTGTGGAATTGATGTATG CATCATCTATTTTTCAAATACCGGAGTTGGTATCACTTTTCCAGGTAAACATTCTATTTTCATAATTTAATTAAGTGATAAGCCATGACTAGTTACTTGG TCCTTTTTAGCAATACTCAATATCTTAATTCTGTAGTAATGATTTTCCTGTATGTCCATTATTATGCATTGTCAATATTGCAAATTGTGAGTTTAAGTTT AGAAATGGGGAAAAATGGAAATATCCGGTGGCACACATTAACGCCAAGAAAGAAACTGTGAATGATGAAGTTGAGGGATTTCATTTTAATTAGGATTAAT TGTTAATTCAACCAAACTTTTATATCATTTGATTCTGGAGGAGTCTGAAATTGATCTTTATAATTAGTGTACCATATATGTTGCTTTACTTAGCCTCATA CCTCGTACAGATCTCGTGCCTAGGCACTATGTATTTAACTTAGCTCCATAGTAGCTTTATCAAAGTATTGACTATTGAAAACAATGGACTCTATTTGATG TGCTAATCCTTGGAAAAAGTACATTCAAATTAACTTTGCATTTAAATTACTACCAATGTTGTGTCTGATCAAGCTTGAGGGGCAAGAAACTACTTAATAC TTTAACTTTTGCAGAGACGTCTTCTTAACTTTATAGGAAGGGCACTTGTAGAAGATGTTATACCGATTCTCATGGTTGCTTTCCATTGTCAATTGAGTCA ACTTGTCACTCAATGTGTTGACAGGGTGGCACGATCAGACCTTGACTGGATCTCTATTCAGAAAGAGCTTCCCTTTGAGCTATCAGAAAATGTTAAATTG CTCCGCAACCCTAAAAAAGAAGTTGAAAATGATGATCCTCCTGTAGTGGACACTATATCTCTAAAACGAATCGGTAGAATACACAAGGCATTAGACTCAG ATGATGTCGAGCTTGTTAAACTTCTTTTGAATGAGTCAGACATCACTTTAGATGGAGCCAATGCTCTCCATTATGCTGCAGCCTACTGTGATCCGAAGGT TGTTTCTGAGGTACTTAGTTTGGGTCTGGCTGATGTCAATCTTCGGAATTCTCGGGGATACACGGTTCTTCACATTGCTGCCATGCGTAAGGAGCCTTCC GTTATAGTGTCACTTCTTACAAAAGGGGCTATTGCATCAGATTTGACATTTGATGGTCAGAGTGCTGTTAGTATTTGCAAGAGGTTGACAAGGCCAAAGG ATTATCATACAAAAACAGAACAGGGGAAAGAAACAAACAAAGACCGGATATGCATCGATGTCCTTGAAAGAGAAATGCGGAGGAATCCATTGGCTGGGGA TGCCTCTATCTCATCCCACACAATGGCCGATGATATCCACATGAAGCTACTATACCTTGAGAACAGGGGAACTTGCATACTTTTTTGAGGAAAATCTATT GTTGATAACTGATTATACTTTGTTCATGGGATATTTATACTCAAACCATCAAATAAGAAGGTAATACTTACTGCCCATTGCAGTGGCATTTGCGAGGGTA TTGTTCCCTTCGGAAGCCAAACTAGCCATGGACATCGCACATGCCGAGACAACATCGGAGTTTGCTGGTATTTCTGCACCTAAAGCTTCAAATGGAAGCA TCAGGGAGGTTGATCTCAATGAGACTCCCATAATGCAAAACAAAAGACTTCTTTCTCGGATGGAAGCCCTAATGAAAACAGTGGAGATGGGGCGACGCTA TTTTCCTCATTGCTCGGAAGTGTTAGATAAGTTCATGGAAGATGACCTGCTTGATTTATTTTATCTCGAGAAGGGAACCCGAGAAGAGCAAGGAGTGAAG AGGAAGCGTTTCATGGAGCTCAAAGATGATGTCTACAAGGCTTTCACCAAGGACAAGGCTGGGTTCAGCCGCACCGGAATTTCAACTTCATCATCCTCTT CATCCCTCAGAGATTCTGTACATTACAAAGCTAGGAAAGTGTGAAAAGCATAGTTTCTCTATGACTTGCATACACATATATAGTGCAAATTTTAAATGGT GATATAGCTACCATCTCTTCTGTATCTGAAAACACAAAGTGGGAAAGTTGATCTCTTACTATCTTTTTTGTAATCAACTTGTTCAAGTATTTTGAAAATA ATCTCCTCTCCCCTTTACAGTACAGATTATGTAAGAAATTACATGGAGTCAATTTTTTGTATTGCTATTTCCTATGATACTTTTTGATATACTCTTTAGC TATAAGATATTAATAATTTAAAACTTGTTATAGTAAATCATTGTGATGAAGTTACTGTTCTGTTGTACTTAAT
• Tissue: pods
• Gene name: LI_gene_189978;
• Additional information: details;

Expression of Ll_transcript_474241

FPKM

• PAB: 0.5
• PNAB: 0.3
• PS1: 1.5
• PS2: 0
• PS3: 0
• PW1: 0.1
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_474241

• Blastp: Regulatory protein NPR4 from Arabidopsis with 64.17% of identity
• Blastx: BTB/POZ domain and ankyrin repeat-containing protein NPR2 from Oryza sativa with 62.75% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (AT4G19660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419190.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;