Ll_transcript_474257

• Id Trinity: TRINITY_DN52091_c1_g3_i3
• Name Transcript: Ll_transcript_474257
• Sequence: GTTCTTCCTCTCCTTGTCAACAACACCAACACACACACTTCCTTTTTCTTCTCTCTCTCTCTCTCTCTCTTCTTCTGTGACAACGATAAACGAAGTTTCC TTCCGCAAATTTTTAACCTTTGACTTCTAAGTCTCCTCTGTAATTTCCCTTTGATTCTCTCTCTTTTGCTTTCTGGGTCAATCAAAGTTCCAACCTTTTT CTCATTTCGATAGATCTAATACCAAATCTTTTTACTTTCTTCTACTGGGTCGGGTTCCTCCTTTCTCAAATTCCTCATCAGTTTTGGGTTTAGTTTGATT ATGCTGCTTTGGTGGCTCTGGAAATTCAAACTAATCGCTTCTTAATCTTTTTTGTTGTTGTTGTTGTTGTTGTAGTAGTAATAGTTTTGATGTGTTAAAA TTTGCAGATATATCATTTTTTTCTTGTTCCATAGGGTGATTTAAGATTTATATTGAAAGTTTGACTCTTTCTTAGATTTCATGTATTTGGTTAATATTTT GCAGCCACCACTTGTTAGATAAGTGTTTTTCATTCATAGTTTCTATTTATAAGATGCTTCTGCTTTTTTCCCTTTTTGGTTTTTGCTTCTATTAGTCATT ACAAAAGTTATTGGAACTTAATTTGTGAGGGGACATTAAAGTGTGATGTCTTTGAATATGTTCTACCTTTCTAGGATCAATTAGGTTCTCAAGTGGATTT AATGGCTCATTCAGCTGAACCCTCATCATCTTTAAGCTTTACATCATCTTTATCGAATGGTTCAGTCAACCACAACATGTGTACTTCTTATGGCCCTGAT CCCGGTCTTAACCTTGATGTCGTAAGTTTGAATAAGCTTAGCTCTAATTTGGAGCAGCTTTTGGTTGAATCTGGTTCTGATTATAGTGATGCTGATGTCG TAGTTGAAGGAATTCCGGTCGGTGTTCATCGATGTATCCTGGCCTCTCGGAGTAAGTTTTTCAATGAATTGTTCAAGAAAGAGAAAAATTCATCAGAAAA AGAAGGGAAATTGAAGTATTTCATGAGTGATATGTTGCCTTATGGCAAGGTTGGATATGAAGCCTTCAACATATTTCTAGGCTATGTATATACTGGAAAA CTAAAGCCCTCTCCGACCGAGGTATCTACTTGTGTTGACAATGTGTGTCTTCATGATTCCTGTAGACCTGCAATTAACTTTGCTGTGGAATTGATGTATG CATCATCTATTTTTCAAATACCGGAGTTGGTATCACTTTTCCAGAGACGTCTTCTTAACTTTATAGGAAGGGCACTTGTAGAAGATGTTATACCGATTCT CATGGTTGCTTTCCATTGTCAATTGAGTCAACTTGTCACTCAATGTGTTGACAGGGTGGCACGATCAGACCTTGACTGGATCTCTATTCAGAAAGAGCTT CCCTTTGAGCTATCAGAAAATGTTAAATTGCTCCGCAACCCTAAAAAAGAAGTTGAAAATGATGATCCTCCTGTAGTGGACACTATATCTCTAAAACGAA TCGGTAGAATACACAAGGCATTAGACTCAGATGATGTCGAGCTTGTTAAACTTCTTTTGAATGAGTCAGACATCACTTTAGATGGAGCCAATGCTCTCCA TTATGCTGCAGCCTACTGTGATCCGAAGGTTGTTTCTGAGGTACTTAGTTTGGGTCTGGCTGATGTCAATCTTCGGAATTCTCGGGGATACACGGTTCTT CACATTGCTGCCATGCGTAAGGAGCCTTCCGTTATAGTGTCACTTCTTACAAAAGGGGCTATTGCATCAGATTTGACATTTGATGGTCAGAGTGCTGTTA GTATTTGCAAGAGGTTGACAAGGCCAAAGGATTATCATACAAAAACAGAACAGGGGAAAGAAACAAACAAAGACCGGATATGCATCGATGTCCTTGAAAG AGAAATGCGGAGGAATCCATTGGCTGGGGATGCCTCTATCTCATCCCACACAATGGCCGATGATATCCACATGAAGCTACTATACCTTGAGAACAGGGTG GCATTTGCGAGGGTATTGTTCCCTTCGGAAGCCAAACTAGCCATGGACATCGCACATGCCGAGACAACATCGGAGTTTGCTGGTATTTCTGCACCTAAAG CTTCAAATGGAAGCATCAGGGAGGTTGATCTCAATGAGACTCCCATAATGCAAAACAAAAGACTTCTTTCTCGGATGGAAGCCCTAATGAAAACAGTGGA GATGGGGCGACGCTATTTTCCTCATTGCTCGGAAGTGTTAGATAAGTTCATGGAAGATGACCTGCTTGATTTATTTTATCTCGAGAAGGGAACCCGAGAA GAGCAAGGAGTGAAGAGGAAGCGTTTCATGGAGCTCAAAGATGATGTCTACAAGGCTTTCACCAAGGACAAGGCTGGGTTCAGCCGCACCGGAATTTCAA CTTCATCATCCTCTTCATCCCTCAGAGATTCTGTACATTACAAAGCTAGGAAAGTGTGAAAAGCATAGTTTCTCTATGACTTGCATACACATATATAGTG CAAATTTTAAATGGTGATATAGCTACCATCTCTTCTGTATCTGAAAACACAAAGTGGGAAAGTTGATCTCTTACTATCTTTTTTGTAATCAACTTGTTCA AGTATTTTGAAAATAATCTCCTCTCCCCTTTACAGTACAGATTATGTAAGAAATTACATGGAGTCAATTTTTTGTATTGCTATTTCCTATGATACTTTTT GATATACTCTTTAGCTATAAGATATTAATAATTTAAAACTTGTTATAGTAAATCATTGTGATGAAGTTACTGTTCTGTTGTACTTAAT
• Tissue: pods
• Gene name: LI_gene_189978;
• Additional information: details;

Expression of Ll_transcript_474257

FPKM

• PAB: 36.1
• PNAB: 16.6
• PS1: 29.2
• PS2: 13.5
• PS3: 18
• PW1: 45.1
• PW2: 41.2
• PW3: 39.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_474257

• Blastp: Regulatory protein NPR3 from Arabidopsis with 62.36% of identity
• Blastx: Regulatory protein NPR3 from Arabidopsis with 61.98% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (AT5G45110)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419190.1)
• Pfam: BTB/POZ domain (PF00651.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;