| Id Trinity | TRINITY_DN52091_c1_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_474268 |
| Sequence | GTGGCATTTGCGAGGGTATTGTTCCCTTCGGAAGCCAAACTAGCCATGGACATCGCACATGCCGAGACAACATCGGAGTTTGCTGGTATTTCTGCACCTA AAGCTTCAAATGGAAGCATCAGGGAGGTTGATCTCAATGAGACTCCCATAATGCAAAACAAAAGACTTCTTTCTCGGATGGAAGCCCTAATGAAAACAGG TAACTCCAGCCTTTGTTAAACTTAAATTCAAGACATGCTTAAGTATATTGTTTGTTCTGAAGCCAATTGCTTGGATACAAAGTCTTTTGTATTTTCTCTT TCCCTTCTTCCTCGGTGAAGCTATCAATTGTTTACCTTACCTTTATCGGGAATCTCGTGGTCACTTTTTATCTTTATGCTTCTCATTTATCAAAATTCAT TGTTTTCCTTGATAAAATTAGAAACATGCATGAAGATTATTTAACATGGAAAACTGCACAATTCATGCAAGCGTAGTGTAATGGCATACTTCATTACTTA AGCCGATCAAGTATCTATTCCTTACAAAATATCTCTTTGTTTCCACCCTTTTAGTTGAATCAAAATATCTCACTTTTTATCCCTCATGTCCTACTTTGTT CTATTTATAAAATATACCATGTTCTATTCTATGTCTACCAAACATGACCTAAGGAGAATGACTAATGTTATGTTATTGTTAAAAGTCTAGATTATAATGG ATCCTACATCTTACAGATGCATAATCCTTAAAATTATTTTGTTAGAAGTTTATTTTCCTCTTGTTACTCAAGTAGTTTGTGTTTTACTACATTTCTGATA CCAACCATCTTCGGTTCTTATGGTTGTTGTGATGATGGCAGTGGAGATGGGGCGACGCTATTTTCCTCATTGCTCGGAAGTGTTAGATAAGTTCATGGAA GATGACCTGCTTGATTTATTTTATCTCGAGAAGGGAACCCGAGAAGAGCAAGGAGTGAAGAGGAAGCGTTTCATGGAGCTCAAAGATGATGTCTACAAGG CTTTCACCAAGGACAAGGCTGGGTTCAGCCGCACCGGAATTTCAACTTCATCATCCTCTTCATCCCTCAGAGATTCTGTACATTACAAAGCTAGGAAAGT GTGAAAAGCATAGTTTCTCTATGACTTGCATACACATATATAGTGCAAATTTTAAATGGTGATATAGCTACCATCTCTTCTGTATCTGAAAACACAAAGT GGGAAAGTTGATCTCTTACTATCTTTTTTGTAATCAACTTGTTCAAGTATTTTGAAAATAATCTCCTCTCCCCTTTACAGTACAGATTATGTAAGAAATT ACATGGAGTCAATTTTTTGTATTGCTATTTCCTATGATACTTTTTGATATACTCTTTAGCTATAAGATATTAATAATTTAAAACTTGTTATAGTAAATCA TTGTGATGAAGTTACTGTTCTGTTGTACTTAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_189978; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_474268
| Blastp | - |
|---|---|
| Blastx | BTB/POZ domain and ankyrin repeat-containing protein NPR2 from Oryza sativa with 63.64% of identity |
| Eggnog | Ankyrin Repeat(COG0666) |
| Kegg | Link to kegg annotations (4325503) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419190.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |