Ll_transcript_474541

• Id Trinity: TRINITY_DN52097_c2_g1_i13
• Name Transcript: Ll_transcript_474541
• Sequence: GAAGAATCCCTCTGATTTTGATATATTACAGCAAGGTCCTCGCGAGAGTGAAGGTGAGGAATTGAATTGAATTGAATTGAATTCGATCTATCTGCGGTGT AGTAATCGAATCGAAGAAGCGGTATTCCGAGATCTGAAAATGGCGATGGACAAATCAAGCGCGTTAGAATACATCAATCAAATGTTCCCCAACGAGGCAT CACTATCTGGTGTTGAACCACTCATGCAAAAAATTCAGAACGAGATTCGCACCGTTGATGCTGGTATTCTCACCGCTGTTCGTCAACAGAGTAATTCTGG AACTAAGGCTAAACAAGATCTTGCTGCTGCTACATGTGCTGTTGAGGAACTTATGTATAAGATCCGTGAAATTAAAACTAAAGCTGTTCAAAGTGAAACT ATGGTTCAAGAAATTTGCCGTGACATTAAGAAATTGGACTTTGCTAAGAAGCATATTACTACAACTATTACTGCACTTCATCGTCTTACTATGCTTGTCT CTGCTGTTGAACAACTTCAAGCCATGGCTTCAAAACGTCAATATAAAGAGGCAGCTGCTCAGCTGGAGGCAGTGAACCAGCTATGTAGTCACTTTGAGGC CTATAGGGATATTCCAAAGATCATAGAACTGAGGGAGAAGTTTAAGAACATCAAGCAAATACTCAAGTCACATGTGTTTTCTGATTTTTCCAGCTTAGGT ACCGGAAAGGAGACAGAAGAAACGAATTTGCTCCAGCAGTTGTCTGATGCCTGCTTGGTTGTTGATGCATTAGAACCTTCTGTAAAGGAAGAGTTGGTAA ATAATTTCTGTAATAGGGAGCTTACTTCGTATGAGCAAATTTTTGAAGGAGCTGAACTAGCAAAGCTGGATAAGACTGAACGAAGATATGCTTGGATTAA GCGCCGAATGCGATCGAATGAAGAAATTTGGAAAATCTTTCCATCTTCATGGCATGTTTCTTATCGGCTTTGTATCCTATTTTGTAAGAAGACAAGGAAA CAACTTGAGGAGATTCTTTCTAATCTAAAGGAAAAACCAGATGTTGGGACCTTGTTGCTGGCTTTACAGCGAACTTTAGAGTTTGAGGATGAATTAGCTG AAAAATTTGGGGGAGGCACACAAAACAGGGAGATTGGGAATGAAATTGAAGAAATAGGTAGAGGGATTAACTCTAGCACTAATGCTTCAGATATCCGGAA GAAGTATGAAAAAAGACTTGCTGCACATCAAGGAACTGACAGTGAAGAAAAAGATGGAAGTAAAGATTTGGCAGTGCCTGGAGCTGGGTTCAACTTTTGT GGGATCATTTCATCTTGCTTTGAACCTCACTTAACAGTATATGTAGAATTGGAAGAGAAAACACTAATGGAAAGTTTGGAGAAACTTGTTCAGGAGGAGA CATGGGATATTGAGGAGGGAAGTCAGAATAGTATTTTATCCAGTAGCATGCAGCTGTTTCTTATAATCAAGAGGAGCTTGAAGAGATGCAGCGCTTTAAC AAAGAGCCAGACACTATATAACTTGTTCAAGGTTTTCCAAAGAATTCTTAAAGCATATGCTACAAAGCTATTTGCAAGAATTCCAAAGGGGGGCACAGGC ATTGTTGCTGCAGCTACAGGCATGGATGGGCAGATAAAGACATCTGATAGGGATGAAAGGGTGATTTGTTACATTGTCAATTCAGCTGAATATTGCCACA AAACGGCTGGTGAACTATCTGAAAGCGTTTCTAAAATTATTGATCCTCAATTTGCAGATGGGGTGGATATGTCAGAAGTGCAAGATGAATTTTCAGCTGT TATAACAAAATCATTGGTGACTTTGGTGCAAGGCCTGGAAACCAAATTTGACAATGAAATGGCAGCAATGTCACGCGTTCCATGGGCTACTCTTGAAAGT GTTGGTGATCAATCAGAGTATGTAAATGCCATAAATTTGATCCTCACCACTAGCATTCCTGCACTCGGGAGTCTACTTTCACCTGTGTACTTTCAATTCT TTCTGGACAAGTTGGCATCATCTCTTGGTCCGCGGTTTTATTCTAACATTTTCAAATGCAAGCAAATATCAGAAACTGGAGCTCAACAGATGCTATTGGA TACCCAAGCTATGAAGACAATCCTTCTTGAAATTCCTTCCCTTGGTAGACAGACATCAGGTGCTGCTAGTTATTCCAAGTTTGTAAGCCGTGAGATGAGC AAAGCTGAGGCCCTTCTGAAGGTTATACTCTCTCCAGTTGATTCTGTCGCTGATACTTACCGTGCGTTGCTACCTGAGGGTACACCCATGGAATTTCAGC GAATATTGGAGCTTAAGGGTCTAAAAAAAGCCGATGAACAAAGCATACTCGACGACTTCAACAAACATGGACCTGGAATTAAGCAAGCTCATATTACACC TTCAGTTGCCCCAGCTCCACTACTAGCTCCTGTGGTACCTAGTCCCAATGTTGCGGGACTCGTTGCTTCGCATGAGGATGTGCTAACCAGGGCTGCTGCA CTCGGACGAGGAGCCGCTACAACAGGGTTTAAGCGATTTCTAGCTCTAACTGAAGCTGCCAAAGACAGGAAGGATGGGCCTTTCCGAATGCTCTTTAATC CATAACAAACAGAGTGATATTACTCAATTTTTTTGGTGAGAAGCCTATGCTTGTTTCTTGTCAAGTTTTGTTCTGTTTTTTTGTTGTTGTAGGTTTAGTC TTTGGTTCTGTAAGTAATCTATCATGTTTGTCTGTCTTTCATTCAATCAATTAGAAGTTTGCTTTACAAATAAAAAGGTTTACAAACTTGCATCATTTCT TCATCTCTGTTTTCCACTTTTAGCAACAACATTCTATGCAATGGGTGAAATAGATGGAAAAGCTTTATTGATAGATCAAGAAGATTAAACAATAGATTGC TTGGAAAGCTTTGCCCAATTGTATGAATTTTTCTACTTGAT
• Tissue: pods
• Gene name: LI_gene_190023;
• Additional information: details;

Expression of Ll_transcript_474541

FPKM

• PAB: 0
• PNAB: 1.1
• PS1: 0.9
• PS2: 0.5
• PS3: 1.6
• PW1: 0.7
• PW2: 1
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_474541

• Blastp: Vacuolar protein sorting-associated protein 53 A from Arabidopsis with 79.83% of identity
• Blastx: Vacuolar protein sorting-associated protein 53 A from Arabidopsis with 79.2% of identity
• Eggnog: Vacuolar Protein(ENOG410XNMT)
• Kegg: Link to kegg annotations (AT1G50500)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419582.1)
• Pfam: Vps53-like, N-terminal (PF04100.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;