| Id Trinity | TRINITY_DN52097_c2_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_474532 |
| Sequence | ATGAGGATCACTTGTCCCAAAGTATATCCCAACGAAAATATGAATCTTTAATAATTTTTTTGACTGATGTGGGATGTTGGTGTGAGACAGCAGATCCTGG TCCATCCCGAGAATGAAGAATAAGAAGAAGAGTGAAACGTACGTAACTGCATTTTCTTAGATCTGAACATCGCAATGGAGAAATCAAGCGCATTGGAATA TATCAATCAAATGTTCCCCAATGAGCCATCTTTATCCGGCGTTGAACCACTCATGCAAAAAATTCAGAACGAAATTCGCACCGTTGATGCTGGTATTCTA ACCGCTGTTCGTCAACAGAGTAATTCAGGGACTAAGGCGAAACAAGATCTTGCTGCTGCTACATGTGCTGTTGAGGAACTCATGTATAAGATCAGAGAAA TTAAAACTAAAGCTGTTCAGAGTGAGACAATGGTTCAAGAAATTTGCAGAGATATTAAGAAATTGGACTTTGCTAAGAAGCATGTCACTACAACTATCAC TGCACTTCATAGGCTTACTATGCTTGTCTCTGCTGTTGAACAGCTTCAGGTCATGGCTTCTAAACGTCAATATAAAGAGGCAGCTGCTCAGCTGGAGGCA GTGAACCAGCTATGTAGTCACTTTGAGGCCTATAGGGATATTCCAAAGATCATAGAATTGAGGGAGAAGTTTAAGAATATCAAGCAAATACTAAAGTCAC ATGTGTATTCTGATTTTTCCAGCTTAGGTACTGGAAAGGAGACAGAAGAAACGAATTTGCTCCAGCAGTTGTCTGATGCCTGCTTGGTTGTTGATGCATT AGAACCTTCTGTAAAGGAAGAGTTGGTAAATAATTTCTGCAACAGGGAGCTTACTTCATATGAGCAAATTTTTGAAGGAGCTGAACTAGCAAAGCTGGAT AAGACTGAACGAAGATATGCTTGGATTAAGCGCCGAATGCGATCGAATGAAGAAATTTGGAAAATCTTTCCATCTTCATGGGATGTTTCTTATCGGCTCT GTATCCTATTTTGTAAGAAGACAAGGAAACAGCTTGAGGAGATTCTTTCTACTCTAAAGGAAAAGCCAGATGTTGGGACCTTGTTGTTGGCTTTACAGCG AACCATAGAGTTTGAGGATGAATTGGCTGAAAAGTTTGGGGGAGGCACACAAAACAGGGAGATAGGGAATGAGATTGAAAAGATTGGTAGAGGGGCTAAC TCTAGCATTAATGCTTCAGATATCCGAAAGAAGTATGAAAAAAGGCTTGCTGCACATCAAGGAACTGGCAGTGAAGAAAAGGATGGAAGTAAAGATTTGG CAGTGCCTGGAGCTGGGTTCAACTTTCGTGGGATTATTTCATCTTGCTTTGAACCTCACTTAACGGTATACGTAGAATTGGAAGAGAAGACACTAATGGA AAGTCTGGAGAAACTTGTTCAGGAGGAGACATGGGATACTGAGGAGGGAAGTCAGAATAGTATTTTATCCAGTAGCATGCAGCTGTTTCTTATAATCAAG AGGAGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_190023; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_474532
| Blastp | Vacuolar protein sorting-associated protein 53 A from Arabidopsis with 78.57% of identity |
|---|---|
| Blastx | Vacuolar protein sorting-associated protein 53 A from Arabidopsis with 78.57% of identity |
| Eggnog | Vacuolar Protein(ENOG410XNMT) |
| Kegg | Link to kegg annotations (AT1G50500) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440054.1) |
| Pfam | Vps53-like, N-terminal (PF04100.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |