Id Trinity | TRINITY_DN52098_c1_g1_i15 |
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Name Transcript | Ll_transcript_472815 |
Sequence | CTTTAAAAAAGCTGCTAACGTCATCACGTCACGCGTTTCACATCTTTCAGAGTCGAATTTTCTTTCTCTACCTCTGCTGTTTAATATTTTCGTTCTTCAT CATCACCACTCATATTCTCCCTTTTTCACTTTCTCTTCCTCACGCGCCCCCTTCTCCTTGCGACGTCGTCATCGCTCGCCATCTCCCTCCGTTGAATCGC CGCCATTTCCATTCCGCTCCAGGTTATTTGAAGTGTAAGTAAAAGCACAGATTCCCTTTAGGTGCCACTGGAGCTGGATTTAGAGGTGGTTGAGGGCGTG AGGGTGGGGGCAACAACTTTTCACCCATTTGGTTTTGGTGGAACTAGATTGGGCTGCTAATTTCTTTCAGAACCAATTGCAAATTCTTTATATGCTACTT CATTTGCCTTTTATTCTTATGCATTATCCTGCTGGTAAACCTGTGGTTTTGCTAGTATGAGTTAATCTTATATCTTCATGGTGTGTGGAGACGTCCAAGG ATTAATATGGGGATTTTTGACGAGTTACCTCTGCCTTCAGATAAAGCTTATTTGAGAGAAGATCTCTCGAGAATTGATGAGAGTTGGACTGCTGCTCGTT TTGATTCATTACCTCACGTTGTCCACATTTTGACATCAAAAGATCGTGACAATGCTGCCCAAAATTTGAAGGAACAAAGTGATGTTGTCGAGGATGTCGT AGATGAAGTAGTACAATCTTATCATAGTGGTTTCAACAGAGCCATCCAAAACTATTCTCAGATCTTGAGACTTTTCAGTGAATCCACTGAAAATATCTCC GTCTTAAAGGTAGATTTGACAGAGGCAAAGAAGCGCCTTAGTGCCCGCAATAAGCAGTTGCATCAATTGTGGTATCGATCAGTTACATTGCGACACATAA TCTCCCTGTTGGATCAAATTGAAGGCATTGCTCAGGTTCCGGCTCGTATTGAGAAGCTTATTGCAGATAAGCAATATTATGCTGCAGTCCAATTACATTT GCAATCAATGCTGATGCTTGAGCGAGAAGGTCTCCAAACTGTGGGTGCGCTTCAAGATGTTCGTTCTGAGTTAACGAAGTTACGTGGAGTCCTCTTTTAC AAGGTTTTGGAGGATTTGCATGCCCATTTATACAACAAGGGTGAATATAGTGCTGCTGGCTCAAATATGCTAGAGAATGACGATGAAGTACCAACCACCA CTGCTATTGCACTTACTGCCCATAACTCACAACCCCTGTCTCGAAGAACAAGGTCGATCAAAGGTGACAACCAGTCTGGTCTCCAGATTGATGGATCATA TAGGGCAGGATCTGTGGATGGAGGTTCTTTCGATGCCCATGATGACGAAGGTGCTCTGGAATTAACTGATGAAGCAACCTTAGATGGTAATATGGCAACC ATGAAAATCAATGGTGAAAGCAAGATCGGTCTTCGTCAAATGCCAACATGGCTTTCCAATTCGACACCTGATGAATTTCTTGAAACCATTAGAAAGACTG ATGCTCCGCTTCATGTGAAGTATCTTCAGACCATGGTTGAGTGCCTCTGTTTGCTGGGCAAAGTAGCAGCTGCTGGTGCTATGATATGCCAAAGATTGCG GCCTACAATTCATGAGATTATTACATCCAAGATTAAAGCTCATGCCGACCTTTTGAATTCGTCAAGATCTAGCATTGGTACGGGTTCTCGTGCTAGTACA GGAGATTTACACTTTATAAAAGGTCAACTGGAAAGCTATCAATTACCAAAACAGAAGCGTAAGAATGGAATATCTATTGCTGGGACTCTGTTGTCTGTGA GCCCTGTATCACCTCTTATGGCTCCTGGTGGGAAAGGTCAGGTTGCTGCAAAGGAGCTTCTTGATTCAATTTTAGATGTCGTTGTTCGAATATTTGAGAA CCATGTCATTGTCGGCGAACTTTTGGAAGCAAAATCCAGTCAGCATGTTGACATGAACACACCAAAATCAATACCATTAGATATAAATTGGAATCCCGAC TCTGAAGCTTCTCAAGTCACTGGAGGTTACAGTATAGGTTTCTCTCTCACAGTGTTGCAGAGCGAATGCCAACAACTTATATGCGAACTTTTGCGAGCTA CTCCTGAAGCTGCATCTGCTGATGCTGCTGTGCAAACAGCTAGGCTTGCGAGCAAAGCCCCTTCTAAAGACAAAAGGGATCAATCAGAAGATGGTCTTAC CTTTGCATTTCGTTTTACAGATGCTACAGTATCTATTCCTAACCAGGGAGTTGATCTTGTTCACCAAGGATGGAGTAGGAAGAGTCCCAATGTGCTGCAA GAGGGTTATGGTTCTGCAGCAGTTTTACCCGAGGAAGGCATATATTTAGCAGCATCCATATACCGACCTGTGCTTCAGTTCACAGATAAAGTCGCATCAA TGCTGCCAGCAAAGTATTCCCAACTTGGGAATGATGGGCTGCTAGCTTTCATGGAGAACTTTGTGAAAGACCACTTTTTACCTACTATGTTCGTAGACTA CCGAAAAGGCGTACAGCAAGCAATATCAAGTCCCGCTGCATTTCGTCCAAGGGCACATGTGGTCACTGCTTACACTCCGTCAATTGAAAATGGTCGACCT GTATTACAAGGATTGTTGGCTATTGATTATTTGACAAAGGAGGTAAGTTTTAACTTTAATAAGTATCTTAATATGTAAGGTAGGTTATAATTTTTTTTTC CTTCTATATTAAAGACGAGTGATATGATGCCTGTGCTAGTGAGGTTTGGAGTTCAGACATTATTTTATTGACTATATTTGGTATATAGTTTCATCTGATA GTTGTAGACATGTATATTTTTCCCTTCTAGATGTTTGCATCTAATTTGTACAGGTGCTTGGCTGGGCACAAGCAATGCCGAAATTTGCTAATGATTTAGT GAAGTATGTGCAAACTTTTTTGGAGAGGACTTATGAAAGATGTCGGACTTCATACATGGAGGCTGTTCTTGAGAAGCAGAGTTATATGCTTATTGGGAGG CATGATATTGAGAAATTGATGAGGCTTGACCCCTCCAGTGCATTTTTACCAAACCTGCCTGGCCAGTTTAACATGGAGAGTAATTCCTCGGATGCTGAAA CAATTGAGGCTGAACTAGAACTAAGTGAATTACTGCTGAATTTGCGTCCTATTAAGCAGGAGTACTTAATCCATGATGATAACAAACTTATTTTGTTGGC ATCTCTTACTGATTCATTGGAGTATGTTGCAGATTCTATTGAAAGACTTGGACAAACCACTCAAAAGGCATCAAATCATGTTGAAGGAAAATACCATCAC AGTCATTCAGACAGTGCACCTGCAAGGAGTCTAGCATCATTTGCTCAAGATTATAGGAAGTTGGCAGTTGATTGCCTAAAGGTTTTACGCATAGAGATGC AATTGGAGACAATATTTCATATGCAGGAAATGTCAAATACAGAATACTTGGATGACCAAGATGCTGAAGAGCCAGATGACTTCATCATTTCCCTCACTGC GCAGATAACTCGAAGAGATGAGGAAATGGCTCCTTTTATTTCAAATGCAAAGCGGAATTACATATTTGGTGGAATTTGTGGGGTTGCAGCACATACATCT ATTAAGGCTTTGGTGGATATGAAGTCTATTAATCTTTTTGGTGTTCAGCAAATATGTCGAAACACTATTGCATTGGAACAGGCACTAGCTTCTATTCCGT CCATAAACAGTGAAGCAGTTCAACAGAGATTAGATCGAGTTCGCACCTACTATGAACTATTAAACATGCCATTTGAGGCCTTGCTTGCCTTCATTACAGA ACATATGCACTTGTTTCCCCCTGCTGAGTATGCCAACCTTCTTAATGTTCAGGTCCCGGGAAGGGAGATTCCTTATGATGCACAGGATCGAGTATCTGAA ATATTATCCCTTTAGTGTGTTCATTAATTTGTTTATATTCCAGAGTTTGTTTTCGACGCTTGCTGCTTGCGTCATATAGAACATTGATTCGTATTTCTGA TAAACCCCAATGCAACAAGCGGATGCAGATGTCCAATTTTACATGAAGTTACAACTGAATAAGGCACTAGTTAAAAGATGGCTTTGATTCTACCTCATGA TAGCAGTTCCATTTTTTCATCGTTTGCTTGTTCAGTAATTTATAATGTGCTGTCAATTTTTCGCTGCTGCTATATCTCCAGGGTTGAGTGAGTGTGATGA GGAAATCACATGTATTGTGACGCAATGACTAATTTCTGGCCAGATATTTTGATAATTTCTTTCCTATTACAATTCTGAGTCCTATTTCACTAAAGTGAAA TTTTGTCCACTTGGAAGTTTTTAAATCTGACATGCTCTGGCGGTTAATTTATGATATTAAACTTATTTTATGTTTTAATTATTAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_190029; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_472815
Blastp | Exocyst complex component SEC8 from Arabidopsis with 73.18% of identity |
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Blastx | Exocyst complex component SEC8 from Arabidopsis with 73.18% of identity |
Eggnog | Exocyst complex component(ENOG410Z8N0) |
Kegg | Link to kegg annotations (AT3G10380) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434380.1) |
Pfam | Sec8 exocyst complex component specific domain (PF04048.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |