Ll_transcript_472825

• Id Trinity: TRINITY_DN52098_c1_g1_i21
• Name Transcript: Ll_transcript_472825
• Sequence: CGGAGGGGTACCACGGTTCAGGTTTTATTGCCATCATCATGTATATTCTTTCCCCCCTTTTCTTTGCTCATTTTTTTCTACCCAACCATAAATAGCATCA GTGTCGACCTGTAACAACTCTTTAATACTAGGCTTCCTTCATTGTAAAAGTCAAATTCAGCCTTCATTGAGTTTCCTCTTCCTCACGCGCTCCCTGTTCA ATACGACGTCGTTCACCTTCTTCCTCCGTTGAATCGCCGCCATTTTCATTCAGCTCCAGTTCAAGTAAAAGCACTGGTTCCCTTTAGGTGACACTGGAGC TGGATTTAGAGGTAAAATTGTGGGTTTTTTAGTATGAGTTAATCTTATATCTTCATGGTGTGTGGAGACATCCAAGGCTTCATATGGGGATTTTTGACGA GCTACCTATGCCTTCAAATAAAGCTTATTTGAGAGAAGATCTCTCGAGAATTGATGAGAGTTGGACTGCTGCTCGTTTTGATTCATTACCTCACGTTGTC CACATTTTGACATCAAAAGATCGTGACAATGCTGCCCAAAATTTGAAGGAACAAAGTGATGTTGTCGAGGATGTCGTAGATGAAGTAGTACAATCTTATC ATAGTGGTTTCAACAGAGCCATCCAAAACTATTCTCAGATCTTGAGACTTTTCAGTGAATCCACTGAAAATATCTCCGTCTTAAAGGTAGATTTGACAGA GGCAAAGAAGCGCCTTAGTGCCCGCAATAAGCAGTTGCATCAATTGTGGTATCGATCAGTTACATTGCGACACATAATCTCCCTGTTGGATCAAATTGAA GGCATTGCTCAGGTTCCGGCTCGTATTGAGAAGCTTATTGCAGATAAGCAATATTATGCTGCAGTCCAATTACATTTGCAATCAATGCTGATGCTTGAGC GAGAAGGTCTCCAAACTGTGGGTGCGCTTCAAGATGTTCGTTCTGAGTTAACGAAGTTACGTGGAGTCCTCTTTTACAAGGTTTTGGAGGATTTGCATGC CCATTTATACAACAAGGGTGAATATAGTGCTGCTGGCTCAAATATGCTAGAGAATGACGATGAAGTACCAACCACCACTGCTATTGCACTTACTGCCCAT AACTCACAACCCCTGTCTCGAAGAACAAGGTCGATCAAAGGTGACAACCAGTCTGGTCTCCAGATTGATGGATCATATAGGGCAGGATCTGTGGATGGAG GTTCTTTCGATGCCCATGATGACGAAGGTGCTCTGGAATTAACTGATGAAGCAACCTTAGATGGTAATATGGCAACCATGAAAATCAATGGTGAAAGCAA GATCGGTCTTCGTCAAATGCCAACATGGCTTTCCAATTCGACACCTGATGAATTTCTTGAAACCATTAGAAAGACTGATGCTCCGCTTCATGTGAAGTAT CTTCAGACCATGGTTGAGTGCCTCTGTTTGCTGGGCAAAGTAGCAGCTGCTGGTGCTATGATATGCCAAAGATTGCGGCCTACAATTCATGAGATTATTA CATCCAAGATTAAAGCTCATGCCGACCTTTTGAATTCGTCAAGATCTAGCATTGGTACGGGTTCTCGTGCTAGTACAGGAGATTTACACTTTATAAAAGG TCAACTGGAAAGCTATCAATTACCAAAACAGAAGCGTAAGAATGGAATATCTATTGCTGGGACTCTGTTGTCTGTGAGCCCTGTATCACCTCTTATGGCT CCTGGTGGGAAAGGTCAGGTTGCTGCAAAGGAGCTTCTTGATTCAATTTTAGATGTCGTTGTTCGAATATTTGAGAACCATGTCATTGTCGGCGAACTTT TGGAAGCAAAATCCAGTCAGCATGTTGACATGAACACACCAAAATCAATACCATTAGATATAAATTGGAATCCCGACTCTGAAGCTTCTCAAGTCACTGG AGGTTACAGTATAGGTTTCTCTCTCACAGTGTTGCAGAGCGAATGCCAACAACTTATATGCGAACTTTTGCGAGCTACTCCTGAAGCTGCATCTGCTGAT GCTGCTGTGCAAACAGCTAGGCTTGCGAGCAAAGCCCCTTCTAAAGACAAAAGGGATCAATCAGAAGATGGTCTTACCTTTGCATTTCGTTTTACAGATG CTACAGTATCTATTCCTAACCAGGGAGTTGATCTTGTTCACCAAGGATGGAGTAGGAAGAGTCCCAATGTGCTGCAAGAGGGTTATGGTTCTGCAGCAGT TTTACCCGAGGAAGGCATATATTTAGCAGCATCCATATACCGACCTGTGCTTCAGTTCACAGATAAAGTCGCATCAATGCTGCCAGCAAAGTATTCCCAA CTTGGGAATGATGGGCTGCTAGCTTTCATGGAGAACTTTGTGAAAGACCACTTTTTACCTACTATGTTCGTAGACTACCGAAAAGGCGTACAGCAAGCAA TATCAAGTCCCGCTGCATTTCGTCCAAGGGCACATGTGGTCACTGCTTACACTCCGTCAATTGAAAATGGTCGACCTGTATTACAAGGATTGTTGGCTAT TGATTATTTGACAAAGGAGGTGCTTGGCTGGGCACAAGCAATGCCGAAATTTGCTAATGATTTAGTGAAGTATGTGCAAACTTTTTTGGAGAGGACTTAT GAAAGATGTCGGACTTCATACATGGAGGCTGTTCTTGAGAAGCAGAGTTATATGCTTATTGGGAGGCATGATATTGAGAAATTGATGAGGCTTGACCCCT CCAGTGCATTTTTACCAAACCTGCCTGGCCAGTTTAACATGGAGAGTAATTCCTCGGATGCTGAAACAATTGAGGCTGAACTAGAACTAAGTGAATTACT GCTGAATTTGCGTCCTATTAAGCAGGAGTACTTAATCCATGATGATAACAAACTTATTTTGTTGGCATCTCTTACTGATTCATTGGAGTATGTTGCAGAT TCTATTGAAAGACTTGGACAAACCACTCAAAAGGCATCAAATCATGTTGAAGGAAAATACCATCACAGTCATTCAGACAGTGCACCTGCAAGGAGTCTAG CATCATTTGCTCAAGATTATAGGAAGTTGGCAGTTGATTGCCTAAAGGTTTTACGCATAGAGATGCAATTGGAGACAATATTTCATATGCAGGAAATGTC AAATACAGAATACTTGGATGACCAAGATGCTGAAGAGCCAGATGACTTCATCATTTCCCTCACTGCGCAGATAACTCGAAGAGATGAGGAAATGGCTCCT TTTATTTCAAATGCAAAGCGGAATTACATATTTGGTGGAATTTGTGGGGTTGCAGCACATACATCTATTAAGGCTTTGGTGGATATGAAGTCTATTAATC TTTTTGGTGTTCAGCAAATATGTCGAAACACTATTGCATTGGAACAGGCACTAGCTTCTATTCCGTCCATAAACAGTGAAGCAGTTCAACAGAGATTAGA TCGAGTTCGCACCTACTATGAACTATTAAACATGCCATTTGAGGCCTTGCTTGCGTTCATTACAGAACATATGCACTTATTTACCACTGCGGAGTACGCT AACCTTCTTCGCCTTCAGGTCCCTGGAAGAGAGATTCCTCCTGATGCACAGGATCTAGTATCTGAACTATTATCCCTTTAGTGTGTTCATTCTTTTGTTT CTATTCCAAAGTTTGTTTTGGACCCCTGAGATGCTTGCATCATATAGAACTCTGATTTTTATTTCTGATCAACGCCGATGCAACAAGCCGATGCAACAAG CCGATGCAGATGTCAAATTTACAACTGAATAGGCCACTAGTTAAAAGATGGCTTTCATTCTACCTTCAGGATAGCAGTTCCATTTTTGGCTTGTTTGCTT GTAATGTAATTTAGAATGTCTGTCTATTTTGGGTTCTGCTGCTTTCTATCTACAGTTGAGTATGAGTATGATGAGGAATTCAATTGAAGCTAATATTAAA AGCAACATGAAAGTCACTTGTATGTTTTTATGACTAAGGATATTGTACAATTTCTCGTAATTACAATTATGAGGCATATTTCTCTTATTATTGTATTGAA T
• Tissue: pods
• Gene name: LI_gene_190029;
• Additional information: details;

Expression of Ll_transcript_472825

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.2
• PS2: 0
• PS3: 0.2
• PW1: 0.4
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_472825

• Blastp: Exocyst complex component SEC8 from Arabidopsis with 72.45% of identity
• Blastx: Exocyst complex component SEC8 from Arabidopsis with 72.45% of identity
• Eggnog: Exocyst complex component(ENOG410Z8N0)
• Kegg: Link to kegg annotations (AT3G10380)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434380.1)
• Pfam: Sec8 exocyst complex component specific domain (PF04048.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;