Id Trinity | TRINITY_DN52098_c1_g1_i4 |
---|---|
Name Transcript | Ll_transcript_472801 |
Sequence | CTTTAAAAAAGCTGCTAACGTCATCACGTCACGCGTTTCACATCTTTCAGAGTCGAATTTTCTTTCTCTACCTCTGCTGTTTAATATTTTCGTTCTTCAT CATCACCACTCATATTCTCCCTTTTTCACTTTCTCTTCCTCACGCGCCCCCTTCTCCTTGCGACGTCGTCATCGCTCGCCATCTCCCTCCGTTGAATCGC CGCCATTTCCATTCCGCTCCAGGTTATTTGAAGTGTAAGTAAAAGCACAGATTCCCTTTAGGTGCCACTGGAGCTGGATTTAGAGGTAAACCTGTGGTTT TGCTAGTATGAGTTAATCTTATATCTTCATGGTGTGTGGAGACGTCCAAGGATTAATATGGGGATTTTTGACGAGTTACCTCTGCCTTCAGATAAAGCTT ATTTGAGAGAAGATCTCTCGAGAATTGATGAGACTTGGACTGCTGCACGTTTTGATTCATTACCTCATGTTGTCCACATTTTGACATCAAAAGACCGTGA CAATGCTGCCCAATCTTTGAAGGAGCAAAGTGATGTTGTTGAGGAAGTTGTAGATGAAGTTGTACAGTCTTATCATACTGGTTTCAACAGAGCCATCCAA AACTATTCCCAGATCTTGAGGCTTTTCAGTGAATCAACTGAAAATGTATCTGTCTTAAAGGTAGATTTGACAGAGGCAAAGAAGCGTCTTAGTTCCCGCA ATAAGCAATTGCATCAATTATGGTATCGGTCTGTTACATTGCGCCACATAATCTCCTTGTTGGATCAAATTGAAGGCATTGCTCAGGTTCCGGCTCGTAT TGAGAAGCTTATAGCAGATAAGCAATTTTATGCTGCGGTTCAATTGCATGTACAATCAATGCTGATGCTTGAGCGAGAAGGTCTCCAAACTGTGGGTGCG CTTCAAGATGTTCGTTCTGAGTTAACGAGGTTACGTGGAATCCTATTTTACAAGGTTTTGGAGGATTTGCATGCCCATTTATACAACAAGGGTGAATATA GTGCTGCAGGGTCAAATACCCTAGAGAATGATGATGAAGTACCAACCACCACAGCTTTTGTACTCACTGCACATAACTCACAACCCTTGTCTCGAAGAAC AAGTTCTTTTGATGGTCATGATGAGGAAGGTGCTTTGGAACTAAACAAGGAAGCCGCCTCAGATGGGAATATGGCAACCATGAGAACCAATGGTGATATC AAAATTGCTCTTCGTCAAATGCCAACATGGCTTTCCAATTCGACACCTGATGAATTTCTTGAAACCATTAGAAAGAGTGATGCTCCGCTTCATGTGGTGT ATCTTCAGACCATGGTCGAGTGCGTTTGCATGCTAGGCAAGGTAGCAGCTGCTGGTGCTATGATATGCCAAAGACTGCGGCCAACAATTCATGAGGTTAT TATGTCCAAGATTAAAGCCCATGCTGACCTTTTGAATTCATCAAGATCTAGCATTGCCCAGGGTTCCCGAGCTGGTACAGGAGATCTACACTTTATAAAA GGTCAACTGGAAAGCTATCAGTTTCCAAAACAGAAGCGTAAGAATGGAATATCGATTGCTGGGACTCTGTTGGCTGTGAGCCCCGTATCGCCTCTTATGG CTCCCGGTGGAAAAGCTCAGGTTGCTGCAAAGGAGCTTCTTGATTCAATTTTGGATGCCATTGTTCGAATATTTGAGAACCATGTCATTGTGGGGGAGCT TTTGGAAGCAAAATCCACTCAGCATGTTGACATTAACACACCAAAATCCATGCCAGTAGATATAAATTGGAACCCTGACTCTGAAACTTCTCAAGTCACT GGAGGTTACAGTATAGGCTTCTCTCTGACAGTGTTGCAGAGTGAATGTCAACAACTTATATGTGAAATTTTGAGGGCTACTCCTGAAGCTGCATCTGCTG ATGCTGCTGTGCAAACAGCTAGGCTTGCGAGCAAATCCCCTTCCAAAGATAAAAGGGATCGATCAGAAGATGGTCTTACCTTTGCGTTTCGCTTCACAGA TGCTACAGTTTCTATTCCTAATCAGGGAATTGATCTTGTTCGCCAAGGATGGAGTAGGAAGGGTCCCAGTGTGCTGCAAGAGGGTTATGGTTCTGTAGCA GTTTTGCCCGAGGAAGGCATTTATTTAGCAGCATCCATATACCGACCTGTGCTCCAGTTCACTGACAAAGTCGCTTCAATGCTGCCAACGAAGTATTCCC AGCTTGGGAATGATGGGTTGCTAGCTTTTGTGGAGAACTTTGTGAAGGACCACTTTTTACCAACTATGTTTGTGGACTACCGAAAAGGCGTACAGCAAGC TATATCAAGTCCTGCTGCATTTCGTCCAAGGGCACATGTTGTCACTGCTTACACTCCATCAATTGAAAATGGTCGACCTGTATTACAAGGATTATTGGCT ATAGATTATTTGACAAAGGAGGTTCTTGGCTGGGCACAAGCAATGCCCAAATTTGCTAATGATCTAGTGAAGTACGTGCAAACTTTTCTGGAGAGGACTT ATGAAAGATGTCGGACTTCATACATGGAGGCTGTTCTTGAGAAGCAGAGTTATATGCTTATTGGGAGGCATGATATTGAGAAATTGATGACTCTTGACCC CTCTAGTGCATATTTACCAAATCTGCTTGGTCAGTTTAACATGGAAAATAATTCCTCAGATGCTGAAACAATTGAGGCAGAATTAGAACTAAGCGAATTA CTGCTGAATTTGCGCCCTATTAAGCAGGAAAACTTAATCCATGATGACAACAAACTTATTTTGTTGGGATCTCTTAGTGATTCATTGGAGTATCTTGCAG ACTCTATTGAAAGGTGGGTTTTCTACGTGCTGTGTAATGTAGACAGTGTTATAATTTGTGAATAATGTGTATAAAGCATTTTATATGCAAGGTAGTCAAA GTTGTGACTTGGATTTAGAAATCACATAGTTCTACAAGTTTTGGTTGATGGAATGTTGCTCCCAGCAAGAAACTGGATCTGTGCTCATTTGTGACTGTGA C BLAST |
Tissue | pods |
Gene name | LI_gene_190029; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_472801
Blastp | Exocyst complex component SEC8 from Arabidopsis with 71.87% of identity |
---|---|
Blastx | Exocyst complex component SEC8 from Arabidopsis with 71.87% of identity |
Eggnog | Exocyst complex component(ENOG410Z8N0) |
Kegg | Link to kegg annotations (AT3G10380) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426697.1) |
Pfam | Sec8 exocyst complex component specific domain (PF04048.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |