| Id Trinity | TRINITY_DN52099_c3_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_472937 |
| Sequence | GACGCTTCCGGTGCATCTTGGATTCTTCATTATAACTGGTTGTTGTAGCTTGTGGTTTTAACGGAGTTATCGGTTAAAAGCACATGTCTTACATTTCAAC ATTATTGTGCCTGCATCATGTAATCTTCTTTATTTCACTTCCCAGGGTAGTGCTGCACAGCCTTCTCTTGTTATTGTTTATTTCGGAGGTAATGATTCCA TGGGTTCCCACTCGTCTGGCTTAGGCCCTCATGTGCCTCTTCCGGAATATATTGAAAACATGCAAAAGATTCTGGTTCATCTTAAGAACCTCTCCGAAAG GACACGTGTCATTGCACTCAGCTGTCCTCCTGTGAATGAGGAAAAAGTCCGTCGAAACACTAGTACAATTTTTAGTGAGCTGGTAAGAACAAATGAATTA TGCCAAAGCTATTCAGAAGCTTGCATAAATCTATGCAAGGAATTGGATGTCAAAGTTGTTGATCTTTTTAATGCATTACAGAAGAGAGATGACTGGATGG ATGCTTGTTTTACGTAAGCTTCTCGACCTCTTTCCTTTATCGTTCTTCTTTCCTAATACCATAAAATTTCAGAGTTAAGTCATTCCGGAATCTAATTGTT CGATATCAAATCCTTCCTTTGCTTGTTCTCTTGGTAAGAAACTCTAAGCCTGCACATAGTTACATTGTCCCCTCGTTTAACATATGTACCACATACTAAA TTCCATTTACCTCGTATGGGTTCATCATAAGGGAAGTCTTGTAATAATAATGTAAAAAGTGACGAACAACATAGAACCAGGTACTGTGTACCGGAATCGG TACTGCATACAATGTAAATATGAGTCTGCAATCACTCATAAAAAACGGTTATTAACTGATACAAATCTTGGATCATGTTAGATGTTGAGTATATGACTAT ATGAGTAATGAACCATTCATAACGGCTTGGGCAATATTAGAGCTCATCTTAATTTTGCGTCACTCGCGTGTGTCTAGTCCTACAAATCTCACACTCTAGA TTTCTAGTTCCACGCGTTACGGAGTGTGCTAAGTGGTATAGTCCTACATGGATTGATATGTTAATATGAGTAATAAACCATTTATAATGGCTTGGGCAAC CTTCCCACCATGAGTTATAGCTTTGAAGTGAAGTTAAGCTCTTTTATTCTAATCATCTGCAAAACAATTGTGGATTCTTGACTACTCATACATTTAGTGT TTTCATTTGTTTTCAAATCCCGGAAATAGCCTCTCCGCTTGCGGGGTAAGGCTGCATACTAATGCCCCTTGTGATTTCTTGTTTAATGTTTTAAGAACAA CCCTTTTTAGTACCCTGCAGCTGTCATAAGCCGTAACTTGTAAATGATAATGATCTCAACTAAAACGATAAATCTACCTAGAATATGTTTAATTCGTTTT CGCCTTTCACGAGTTTCGCAGTGATGGTATCCATTTAGCAGCTGAGGGAAGCAAAATTGTGGTGAAGGAGATACTGAAAGTACTTAAGGAAGCTGATTGG GAGCCATGCCTACACTGGAAATCCATGGCTACTGAATATGCAGAAGACTCACCATATGATCTTGTTGCTGCTGATGGAAAAACTACATTGAATCCTTCTG AGTGGACTTTTTATAGGGAGGTTCAATGGGACTAGGTTGCTAGATTATATCAACTTTTTCATTTGTTCTGATATAGCAGTTTTTCTTATTTATGTTTTGT TTAGACATATTGATTGGTTATTTGGTTATAAATTATGTAATGGTAGCTAACTAAGTGGATAAAAATGCAGTGGTGTTGTGACTGAAATACATAGTGATGT ATTATTATTAAGTCATGAATTTATAATGAATTTATACAAGTCCTTAATCCTTAGTGACATGAGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_190052; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_472937
| Blastp | GDSL esterase/lipase CPRD49 from Arabidopsis with 60.95% of identity |
|---|---|
| Blastx | GDSL esterase/lipase CPRD49 from Arabidopsis with 64.75% of identity |
| Eggnog | lipolytic protein G-D-S-L family(COG2755) |
| Kegg | Link to kegg annotations (AT3G11210) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414304.1) |
| Pfam | GDSL-like Lipase/Acylhydrolase (PF00657.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |