| Id Trinity | TRINITY_DN52100_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_431628 |
| Sequence | AATTAAGAGGGGAATGAGCAACACCATTCATTGGAATTTGGACTACATAAATCTGTGTAATGAAGCCATCGTAGCTTTTTTTTTTCCTTTTCATAACAAG TACAGTAACATCTATTCTCACTGTGAGCATGAATATTGGACCTGTGGTTGAAATTTCTTACCTGCATATACTTTAGTAGCATATATAGTCCATTTTCTTA TAAGCCTTTGTTACACTAGGCAGTACCTACTTCATTTGACAAAATTATTTGTTTATTTCTGACATGTTTAGGAAAATCACATGCTCTTCATAAGAGAGTG GAACAACTCTGCACTAGGGCAATCAGATGGGCTGAATTGACCAGAAAATCAAAGGCAGAGAAGAAACTAGCAATCACAGTCTTCAGTTTCCCTCCAGACA AAGGAAATGTAGGAACTGCTGCCTACCTTAATGTCTTCTCATCCATATACTCTGTTCTAACAGACCTGAAAAGAGATGGTTACAATGTTGATGGACTTCC GGAGACCTCAGAAGCTTTGATTGAAGAAGTAATACATGACAAAGAAGCTCAGTTCAGCAGCCCGAATCTGAACATTGCTTACAAAATGAGCGTCCGCGAG TACCAAAAGTTGACTCCTTATGCTGCTGCATTAGAAGAAAACTGGGGAAAACCCCCTGGCAATCTGAATGCAGATGGAGAGAATTTATTGGTATACGGGA AACAGTATGGTAATATCTTCATAGGTGTACAGCCAACATTTGGCTATGAAGGCGACCCTATGAGGCTTCTTTTCTCCAAATCTGCCAGCCCACATCATGG ATTCGCAGCATATTACTCGTTTGTTGAGAAAGTTTTCAAAGCCGATGCTGTTCTTCATTTTGGAACGCACGGTTCTCTAGAATTCATGCCTGGAAAGCAG GTCGGGATGAGTGATGTATGCTACCCGGACAGTCTTATTGGAAATATTCCAAATGTATATTACTATGCTGCAAACAACCCTTCAGAGGCTACCATAGCCA AACGCAGGAGCTATGCAAACACCATTAGCTATCTGACTCCTCCAGCAGAAAATGCTGGTCTATACAAAGGTCTTAAGCAGCTAAGTGAGCTCATCTCCTC ATACCAGTCCCTGAAGGACACAGGTCGTGGCCAACAAATTGTGAGTTCGATCATCAGCACAGCTAAACAATGTAATCTCGACAAGGATGTGGACCTTCCA GATGAGGGTGTAGAGCTCCCAGCTACAGAGCGCGACCTTGTAGTTGGAAAGGTCTATTCCAAGATCATGGAGATCGAGTCTCGTCTGTTACCTTGCGGAC TTCATGTCATTGGGGAACCTCCCTCAGCTTTGGAAGCAGTTGCTACGCTGGTGAACATCGCTGCACTTGATCGTCCTGAAGAAGGTATTTCTTCTCTCCC GTCAATACTAGCTGAGACCCAAGGAAGAGGCATAGAGGATCTTTACAGAGGGAATGACAAAGGAATATTGAAGGATGTAGAGCTTCTTCGTCAAATAACT GACACATCACGTGAAGCAGTTACTGCCTTCGTGCAGCGTGCTACTAATGATAAGGGTCAAGTTGTTGATGTAGCTGGTAGACTTAGCAAAATCCTTGGAT TTGGCATCAATGAGCCATGGATTCAGTACTTGTCAGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_190059; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_431628
| Blastp | Magnesium-chelatase subunit ChlH, chloroplastic from Arabidopsis with 87.43% of identity |
|---|---|
| Blastx | Magnesium-chelatase subunit ChlH, chloroplastic from Arabidopsis with 87.47% of identity |
| Eggnog | cobaltochelatase, cobn subunit(COG1429) |
| Kegg | Link to kegg annotations (AT5G13630) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425159.1) |
| Pfam | CobN/Magnesium Chelatase (PF02514.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |